Mycoplasma putrefaciens KS1: MPUT_0420
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Entry
MPUT_0420 CDS
T01599
Name
(GenBank) putative phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mpf
Mycoplasma putrefaciens KS1
Pathway
mpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPUT_0420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpf03019
]
MPUT_0420
Messenger RNA biogenesis [BR:
mpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MPUT_0420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
dUTPase
Motif
Other DBs
NCBI-ProteinID:
AEM68793
UniProt:
A0A7U3ZSP2
LinkDB
All DBs
Position
complement(476245..477771)
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AA seq
508 aa
AA seq
DB search
MDKWELYLIIFACSMIVAQLAQWGIIWYLIKSKSRKQLVENRKKEAKLERKKIVADGYKE
INDARNLFNKEVEIEKKELEKIRDKLELQALDVEQAKKTNQAKAQRIEARLLDLDKRRVQ
LDAKEDEIITGLENISKISQDQAKEILIKKMQDRCQVELGTILKNAEIEAHAKSKAIATQ
IMITAMERLKVDVVNQRTSNIVKLPNDDMKGRIIGKDGRNMKTFEQVGGVDIVIDETPNV
ITVSSFNPIRREIATRALENLISDGRIQPVKIEQELKKQEAEVDEIINESGIKTIEELKI
NDLDFELVKLIGKLRFRTSYGQNVLAHSIEVAKISGMIASELGLDANKAIRAGLLHDIGK
ALDFENQGSHVNLGAEIAKKYGEDEIIINAIESHHEDVEKTNEISAIVAIADTISASRPG
ARNNAIGEFVLRMHEIEKIGNQIPGVAKTYALQSGRQIRLIVDPVAVSDLELSLVLQQMT
DAIKKQVVVPGEITITVIREKKEIQVLK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggataaatgagaattgtatctaattatttttgcatgttcgatgattgttgctcaacta
gctcaatgaggcattatttgatatttaataaaatcaaaaagccgaaaacaacttgttgaa
aatcgtaaaaaagaagctaaattagaaagaaaaaaaattgttgcagatggttataaagaa
attaatgatgcaagaaatctttttaataaagaagttgaaattgaaaaaaaagaattagaa
aaaattcgtgataaattagaactacaagctttagatgttgaacaagctaaaaaaactaac
caagcaaaagctcaaagaattgaagcaagattattagatttagataaaagaagagtacaa
cttgatgctaaagaagatgaaattatcactggtttagagaatatttcaaaaatcagtcaa
gatcaagctaaagaaattttgattaaaaaaatgcaagatagatgtcaagttgaattggga
accattttaaaaaatgctgaaattgaagcacatgctaaatctaaagcaattgctactcaa
attatgattacagctatggaaagacttaaagttgatgttgttaatcaaagaacttcaaat
atagttaaacttcctaatgatgatatgaaaggtcgtattatcggaaaagatggtcgtaat
atgaaaacatttgaacaagttggaggagttgatattgtgattgatgaaactcctaatgtt
attactgtttcaagttttaatcctattagaagagaaattgctacaagagctttagaaaat
ttaattagtgatggtagaattcagccagtaaaaattgaacaagaacttaaaaagcaagaa
gctgaagttgatgaaattattaatgaatcaggaatcaaaaccattgaagaattaaaaatt
aatgatttagattttgaattagttaagttaatcggaaaactaagatttagaacaagttat
ggtcaaaatgttttagctcattcaattgaagttgctaaaatctctggaatgattgcttct
gagttaggattagatgctaacaaagctattagagcaggattattacatgatattggaaaa
gcacttgattttgaaaaccagggaagtcacgttaatttaggtgcagaaatagcaaaaaaa
tatggtgaagatgaaattatcataaatgcaattgaatctcatcatgaagatgttgaaaaa
accaatgaaatttcagcaatcgtcgcaattgctgatactatatcagcatcacgacccgga
gctagaaataatgctattggtgaatttgttttaagaatgcatgaaattgaaaaaattggc
aatcaaataccgggtgttgctaaaacatatgctttacaatcaggacgacaaattagacta
attgttgatccagttgctgtgtcagatttagaattgagcctagtgctacaacaaatgact
gacgcaattaaaaaacaagtggttgtaccaggtgaaataacaatcacagtaattagagaa
aaaaaagaaattcaagtcttaaaataa
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