Monomorium pharaonis (pharaoh ant): 105830733
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Entry
105830733 CDS
T05760
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105830733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105830733
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105830733
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
ANAPC3
TPR_8
TPR_10
Motif
Other DBs
NCBI-GeneID:
105830733
NCBI-ProteinID:
XP_012525698
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All DBs
Position
11:3715003..3721135
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AA seq
685 aa
AA seq
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MSETSETQNKDSGSVITEQERELAQNILLEFRKGSYALCLTYLNKLESLRPTDLKVMHNK
VVVEYYKSDLKKTELTRKSLNAICGQMSTSDSNETIDDVEKCVMRYNQAVLLYHNKQYNA
ALQIMTRLFAFIEPMEETLAHKVCLLLIELYIVTEQPDAALSIQNYVESQFISTDSSKIS
AIDKDGVIKSIKEQKEPKKDTVGDTAIDAFKIKLLKYKARIYLLTHQLKLCKKEWKTLVS
LGTVNTSTIFLKANLEYLRGNYDKAMQFLNSKMKENLDFKLCGESSTVLFYNNMACLHLA
MGKPTLACSYLQRALRVNDSAVKSMQDKDIDSSQPLYMLGGDKHSELMYNLGVSFLYAGK
ASKAFDCFTDVAQRVCNNPKLLLRMAECCICNHKSSNEVDFNISKRCKDLVQEVMGSGIH
KKIILPTSLSKDTKYHSEGLSYAIPQPTLEFGYLCLKNALFLLSNNNEPNVPITAMANSL
SLTPGHNLGIQHVTLTSRSTAIESFNLKISVLAASAYVSLCLGDYIFSLEYAKTLLSFNK
LPGAYKMLGNLYAAESLIFMDKISEALEYLKLENLQDLNTFMSMSEIQEKDKEKAEEIMV
KPVKAWYPTTLSTGIAVIHYNLAVAYAIRGELDKSGEILKQIWISKEPDCGIPIQVIMLA
LYIELQLGHADVSKSIIKQHCPQYR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacttcggaaacacagaataaagatagtggttctgttataactgaacaagag
cgcgagttggctcaaaatatactgttggaatttcgaaaaggttcctacgccttgtgttta
acatatttaaataaattggagagtctacgacctactgatcttaaagttatgcataacaaa
gttgtagtggaatattataaaagtgatttgaagaaaactgagctgacacgaaagagttta
aatgctatatgtggtcaaatgtcaacgtcggattccaacgagactatcgatgacgtcgag
aaatgtgttatgagatacaatcaagccgttttgttatatcataataaacaatataatgct
gcgcttcaaattatgactaggctgtttgcctttatcgagccaatggaggaaactttggca
cataaagtgtgtctgttactgatagagttatacatagtaacggagcaaccagatgcagct
ctgtcaatacaaaattatgttgagagtcaatttatatctaccgatagttccaagatatct
gctattgacaaggatggagtaataaaatctatcaaagagcaaaaggagccaaagaaagat
acagttggtgatacagcgatagatgcattcaagattaaacttttgaaatataaagcgaga
atatatctcctaactcatcaattaaaactctgtaaaaaagaatggaagacattagtttca
ttgggcacagtgaatacatcaaccatttttttgaaggctaatttggaatatttacgagga
aattatgataaagcaatgcaatttttgaattctaaaatgaaagaaaatttagattttaaa
ttatgtggagaatcgtcaactgttttgttttataacaatatggcatgtctgcatctcgca
atgggcaagccaactttagcttgttcttatcttcaaagagctttgcgcgtgaatgatagc
gctgtgaagagcatgcaagataaagacattgattcttctcaaccattgtatatgcttggt
ggcgataaacattccgagttaatgtacaatttgggtgtatcatttttgtatgctggtaaa
gcgtcaaaagcctttgactgctttacagatgtagcgcagagggtatgcaataatccgaaa
ctcttacttagaatggcagaatgttgtatctgcaatcataaatcttcaaatgaagtcgat
ttcaatatttcaaaaagatgtaaggatctggtacaggaagttatgggttctggtattcat
aaaaaaatcatattacctacatctctttcaaaagatactaaatatcattcagaaggccta
tcctatgcaattccacaaccaacattggaatttggatatttatgtctgaaaaatgcatta
tttttactttcgaacaataatgagccaaacgtacctataacggctatggcgaattcatta
tcattaacacctggtcataacttaggtattcaacatgtaacgttaacgtcacgatctaca
gctatcgaatcttttaatttaaaaattagtgttttggctgctagcgcttatgtctctttg
tgtcttggagattatatattttctctcgaatatgcaaaaactctattaagttttaacaag
ttacctggtgcatacaaaatgttaggcaacttatatgccgctgaaagtttaatatttatg
gacaaaataagtgaagcactcgaatatctgaagcttgaaaatcttcaagatttaaataca
tttatgtctatgtcagaaattcaggagaaggataaggaaaaagcggaggaaattatggta
aagcctgtaaaagcttggtatcctacaacactttctacaggcattgctgtgatacattac
aacttggccgtagcttatgccatacgaggcgaactagataaatctggagaaatcttaaaa
caaatatggatatcaaaagaaccagattgtggtatacctatacaagtgataatgttggcc
ttgtatatagagctacaattaggtcatgctgacgtttcaaaatcaataataaaacaacat
tgtccacaatatcgttaa
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