Monomorium pharaonis (pharaoh ant): 105839546
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Entry
105839546 CDS
T05760
Name
(RefSeq) exosome complex component rrp45 isoform X1
KO
K03678
exosome complex component RRP45
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105839546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105839546
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105839546
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105839546
NCBI-ProteinID:
XP_012541390
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Position
11:complement(4674304..4676996)
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AA seq
393 aa
AA seq
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MFCNLYRMKEITLTNCERNFINKCIEEETRLDGRKLLEPRSVKIYFGSSWGCCMVSLGHT
RVVTQVSCDIQQPKTSRPNEGTIRINVELTPLAAQHFEGGRQSEAAILISRQLEKCFKDS
KCIDLESLCIVADKKVWNLRIDVNIINHDGNLVDCASIAMLAALMHFHRPDVTSTGEEII
IHPASEKDFLPLTLFHYPICVSFITFQSGNTIMDPTYSEERVGVAELTLGINSYRELCSL
HFDYLTKTMTVKDVISTVSNHAANYATELVQQIKDAVVKDVQSRYKKDDSSISRFKDSIQ
VNKLTTTIGEHLSIKLRKWDKMAVVEDDFMEVDENKSRIIKYEDGSAELVPIFDDSVNKE
ENVTAYDSDWDEILVKSPSPERKKIDVIDLDSD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtaatttatataggatgaaggagataactcttacaaactgcgaacgaaatttt
ataaacaaatgtatagaagaggaaacgagattagacggccgaaaattgttagagccacgt
tcggtaaagatctattttggctctagttggggttgttgtatggtgtctcttggtcataca
agagtagtaacgcaagtgtcatgcgatatacaacagccaaaaacgtcccgacccaatgag
ggcactatacgcataaacgtcgagcttactccattagcagcgcaacattttgaaggtggt
agacagtctgaagcagctatactgatcagtaggcagctggaaaaatgttttaaagattca
aagtgcatagacttggaatctctctgtattgtagcagataagaaggtatggaatttgaga
attgacgttaatatcataaatcatgatggcaatctggtagattgcgcttccattgcaatg
cttgctgctcttatgcacttccataggccagacgtcacttctacgggcgaggaaataatc
atacatccggcttctgagaaagattttctgccattaacattattccactatccaatctgt
gtatctttcataactttccagagtggcaacactataatggatccaacatattcagaagaa
agagttggtgttgctgaacttactcttggtataaactcctatagagaactctgtagtttg
cactttgattatttaacgaaaactatgactgtcaaggatgtcatatccactgtttctaat
catgcagcgaattacgcaacggaattggtgcagcaaatcaaagacgcggtagtcaaggac
gtgcagtcacggtacaaaaaagatgatagcagcatatctagatttaaagatagtattcaa
gttaataaattgacaacaacaatcggcgaacaccttagtattaaattacgtaaatgggac
aaaatggctgtagtcgaagatgattttatggaagtagatgagaataagagtcgtatcata
aaatacgaagatggatctgctgaattagtaccaattttcgatgattcggttaacaaagag
gaaaatgttactgcatacgattcagattgggacgaaattctcgtcaaatctccatctccg
gaaaggaaaaaaatagatgtgatagacttagatagtgattag
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