Mycolicibacterium phocaicum: MPHO_10940
Help
Entry
MPHO_10940 CDS
T07283
Name
(GenBank) alternative sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
mphu
Mycolicibacterium phocaicum
Brite
KEGG Orthology (KO) [BR:
mphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mphu03021
]
MPHO_10940
Transcription machinery [BR:
mphu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MPHO_10940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR
HTH_Crp_2
HTH_3
HTH_23
MarR_2
DUF7343
DUF7437
HTH_24
Sigma70_ECF
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
BBZ54102
LinkDB
All DBs
Position
complement(1118314..1119138)
Genome browser
AA seq
274 aa
AA seq
DB search
MSVSLLENDSREVSEPLEDDSSQDEYADVVTMVALLRQLPPNSDAYARQLERIVLRCCPL
ADRVARHFDRRGENLEDLIQVARVGLLQAVNRFDPERGSRFVAFALPTMMGELRRYFRDY
GWKVHVPRRIRDRQHDIACATAYLTNDLRRAPSIEELAEELEIDRDQVVESIVAAKAYQP
QSLDVNVSDDDARTQALGDSLGEMDAGFDRVTDRESVRSLLAALPRREQKVLYLRYFGAM
TQRQIADSIGVSQMHVSRILDRTLRDLRAQVGCA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtttctctgttggaaaacgattctcgtgaagtgagcgagccgctcgaggacgac
tcgagccaggacgaatacgcggatgtggtcacaatggtcgcgctgctccgtcaattaccg
ccgaactccgacgcctacgcccgtcaactcgaacgcatcgtgctgcggtgctgcccgctg
gcggaccgggtggcgcgccacttcgaccgccgcggcgagaatctcgaagacctgatccag
gtggcccgggtgggtttgctacaggcagtcaaccggttcgaccccgagcgggggtcacgg
ttcgtggcattcgccctgcccacgatgatgggggagttgcgccgatacttccgtgactat
ggctggaaggtccacgtacccaggcgaattcgtgatcgtcagcacgatattgcttgtgcc
accgcatatttgacgaacgacctgaggcgggcgccgagtatcgaggagctcgccgaagag
ttggagatcgaccgcgaccaggtcgtcgagagcatcgtggcggccaaggcgtaccagccc
cagtcgctggacgtgaacgtcagcgacgacgacgcacgaacgcaggctctcggtgactcg
ctcggtgagatggatgccggcttcgaccgggtgaccgatcgcgaatcggtacggtcactg
ctggcagcgctgccgcgccgcgagcagaaggtgctctatctccggtacttcggtgccatg
acgcagcggcagatcgcggactcgatcggcgtttcgcagatgcatgtgtcacggatattg
gaccggaccttgcgggacctgcgagctcaagtgggttgcgcctga
DBGET
integrated database retrieval system
