Mycoplasmoides pneumoniae FH: MPNE_0301
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Entry
MPNE_0301 CDS
T01926
Name
(GenBank) HDIG domain protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
mpj
Mycoplasmoides pneumoniae FH
Pathway
mpj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MPNE_0301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpj03019
]
MPNE_0301
Messenger RNA biogenesis [BR:
mpj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MPNE_0301
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
DUF4446
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
ADK87033
UniProt:
A0A0H3DP93
LinkDB
All DBs
Position
318020..319501
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AA seq
493 aa
AA seq
DB search
MSAKLTLESIAKTFAETSIFAILFLIIVILNLGLLVFLAYQYRVYKKKQRANLTKQTYNN
DYGQIVNLKQQNAAKIKELANLKDQLSELGQKFNTTLSEIINKPLVNVIDEYLDEQFKQA
ANFREAELNAVLDSNDQKTVFHKRLFNKFHFGVDKLANINVKNPLNLCWVDSASFTVIES
DFRKLNGVGGINKKLLIEKLRIEDIIFTNIDKKYYEVQILSDSPVKVQKTVLTIRNILIN
DYVDNEKIESYAREANGYFNDHCKLIGKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNV
LSHCLETGFLTAYLALLVNFKPDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFE
NDVKYTIANHHNKNVDNVYCRLTQIGDKLSAGRLGARSDSSVLFNQLKQELKQIVEETLA
QFKTTILLGQSGRRLVIWLETNQHNNIIDNQQLTDLATTIKSKIVQNNITNRFPIKVVLR
YNFEHSFDTKDKN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaagttaacgttagaaagcattgcaaaaacatttgccgaaacatcgatcttt
gcgatcttgtttttaattattgtcatcctcaatttaggtttacttgtttttttagcgtat
cagtaccgtgtttacaaaaagaagcaaagagcaaacctcaccaagcagacttataacaat
gactatggccaaattgttaatttaaaacagcaaaacgctgccaagataaaggagcttgct
aacttaaaagatcagttaagtgaattaggccaaaaatttaacaccacactgagtgaaatc
attaacaaaccacttgtcaatgtgattgatgaatacttggatgaacagtttaaacaagct
gctaattttcgtgaagcagaacttaatgccgttttagatagtaatgaccagaaaacagtg
ttccataagcgtttgttcaataaatttcactttggtgtcgacaagctagctaatattaat
gtcaaaaatccgctcaatttatgctgggttgacagcgctagttttaccgtgattgaaagt
gatttccgcaaacttaatggtgttggcgggattaataaaaagttgttaattgaaaagtta
aggattgaagatattatctttaccaatatcgataagaagtactatgaggtacagatacta
tctgactcgccagtaaaggtacaaaaaacagtgttaactattcgcaacatcttgattaat
gattacgtggacaatgaaaaaattgagtcatatgctagggaagctaacggttacttcaat
gaccactgtaaactgattggtaagcaggtgttagaacgactcaatatctttgaaattagc
cctaaactacacaagttttttggtttattagcgtttcgttattctttcggtcaaaacgtt
ttatcacactgtctggaaactggttttctcaccgcttacctagcgcttttagttaacttt
aaacctgatgttgcattaaagtgcggtttgtatcatgatattggtaaagcggatgatgaa
aacgggaagaagaaccacacggttacaggtgccaagatcggtgatgaattttactttgaa
aacgatgtcaaatacacaattgccaaccaccataataaaaatgtcgataacgtatactgt
cgtttaactcaaattggcgataagctttcagcagggcgtttgggtgcgcgctctgacagt
tcggttttatttaaccaactcaaacaagaattaaagcaaattgtggaagaaacactagca
caatttaaaacaaccatccttttaggacaaagtggacgccgattagtaatttgattggaa
accaaccagcacaataacattattgacaaccaacagttaactgatttggctactaccatt
aaaagcaaaatcgtgcaaaacaacattactaatcgctttccaattaaggtagtattacgc
tataacttcgaacacagctttgatacaaaggacaagaactag
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