Mycolicibacterium poriferae: MPOR_15330
Help
Entry
MPOR_15330 CDS
T07158
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mpof
Mycolicibacterium poriferae
Pathway
mpof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MPOR_15330 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpof03021
]
MPOR_15330 (rpoB)
03400 DNA repair and recombination proteins [BR:
mpof03400
]
MPOR_15330 (rpoB)
Enzymes [BR:
mpof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MPOR_15330 (rpoB)
Transcription machinery [BR:
mpof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MPOR_15330 (rpoB)
DNA repair and recombination proteins [BR:
mpof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MPOR_15330 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BBX50507
UniProt:
A0A6N4V9W4
LinkDB
All DBs
Position
1601776..1605300
Genome browser
AA seq
1174 aa
AA seq
DB search
MLEGCILAGSRQISSEVATDYSVPGAPNRISFAKLREPLKVPGLLDVQTESFEWLVGSDD
WFQRAVDRGDVEPRGGLQEVLEELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMTY
AAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDE
SIDKSTEKLLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQIT
ERFGFSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLA
RVGRYKVNKKLGLHSGEPITSSTLTEEDIVATIEYLVRLHAGDTTMTVPGGVEVPVEVDD
IDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKE
FFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLSVYARVNPFGFIETPYRKVADGVVTDDIVYLTADEEDRHVVAQANSPLD
PESQRFTEDRVLVRRKGGEVEYVSSAEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMG
ANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVADKAGVIEEVSADYVTVMADDGTRH
TYRMRKFARSNHGTCANQRPIVDAGQRVEAGQVIADGPCTENGEMALGKNLLVAIMPWEG
HNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERG
IVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVI
GIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLP
DGTPVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNIQVADGGAGAVPDWASNLPEDLL
SAPSDSIVATPVFDGARENELSGLLGSTLPNRDGETMVNSDGKAVLFDGRSGEPFPYPVT
VGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYT
LQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAA
IEMRDGDDEDLERAAANLGINLSRNESASVEDLA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggatgcatcttggcagggtcccgccagatcagttcagaagtagctaccgat
tactccgttcccggagcacctaaccgaatttccttcgccaaactccgtgagccgttgaag
gttcccgggctgctggacgtccaaaccgagtcattcgagtggctggtcggctccgacgat
tggttccagcgcgccgtcgaccgcggtgacgtggaaccgcgcggcggcctgcaggaggtc
ctcgaagagctgtcgccgatcgaggacttctcgggctcgatgtcgttgagcttctcggat
ccgcgcttcgacgaggtcaaggcgccggtcgacgagtgcaaagacaaggacatgacgtac
gcggccccgctgttcgtcacggccgagttcatcaacaacaacaccggtgagatcaagagc
cagacggtcttcatgggtgacttcccgatgatgaccgagaagggcaccttcatcatcaac
ggcaccgagcgcgtcgtcgtgtcgcagctcgtccgttcgcccggtgtctacttcgacgag
agcatcgacaagtccaccgagaagctgctgcacagcgtcaaggtgatccccggccgcggc
gcgtggctggagttcgacgtcgacaagcgcgacaccgtcggcgtgcgcatcgaccgcaag
cgccgccagccggtcaccgtgctgctgaaggcgttgggctggaccaacgagcagatcacc
gagcgtttcgggttctccgagatcatgatgtccacgctggagaaggacaacacggccggc
accgacgaggcgctgctcgacatctaccgcaagctgcgcccgggcgagccgccgaccaag
gagtccgcgcagacgctgctggagaacctgttcttcaaggagaagcgctacgacctggcc
cgggtgggccgctacaaggtcaacaagaagctggggctgcactccggtgagccgatcacc
agctcgacgctgaccgaagaggacatcgtcgccaccatcgagtacctggtgcggctgcac
gccggcgacaccacgatgacggtgcccggtggagtcgaggtgcccgtcgaggtcgatgac
atcgaccacttcggcaaccgtcgcctgcgtaccgtcggcgagctgatccagaatcagatc
cgggtcggcctgtcgcgcatggagcgcgtcgtgcgtgagcgcatgaccacccaggacgtc
gaggcgatcacgccgcagaccctgatcaacatccgtcccgtcgtggcggcgatcaaggag
ttcttcggcaccagccagctgtcgcagttcatggaccagaacaacccgctgtcgggtctg
acccacaagcgccgcctgtcggcgctgggccccggcggtctgtcccgtgagcgtgccggc
ctcgaggtccgcgacgtgcaccccagccactacggccggatgtgcccgatcgagaccccg
gagggcccgaacatcggcctgatcggctcgctgtcggtgtacgcccgggtcaacccgttc
gggttcatcgagacgccgtaccgcaaggtggctgatggtgtcgtcaccgacgacatcgtc
tacctgaccgccgacgaggaggaccgccacgtcgtggcgcaggccaactcgccgctggat
ccggagtcgcagcgcttcaccgaggaccgcgtcctggtccgccgcaagggcggcgaggtc
gagtacgtctcctcggccgaggtggactacatggacgtctcgccgcgccagatggtgtcg
gtcgcgaccgcgatgatcccgttcctcgagcacgacgacgccaaccgcgccctgatgggt
gccaacatgcagcgccaggccgttccgctggtgcgcagcgaggccccgctggtcggcacc
gggatggagttgcgcgccgcgatcgacgccggcgacgtcgtcgtcgccgacaaggccggc
gtgatcgaggaggtcagcgccgactacgtcaccgtgatggccgacgacggcacccggcac
acctaccggatgcgcaagttcgcccgctccaaccacggcacgtgcgccaaccagcgtccg
atcgtggacgccggtcagcgggtcgaggcgggtcaggtcatcgccgacgggccgtgcacc
gagaacggtgagatggccctgggcaagaacctgctcgtcgcgatcatgccgtgggagggc
cacaactacgaggacgcgatcatcctcagcaaccgtctggtcgaagaggatgtgctcacc
tcgatccacatcgaggagcacgagatcgacgcccgcgacaccaagctgggcgccgaggag
atcacccgggacatcccgaacgtctccgatgaggtgctggccgacctcgacgagcgcggc
atcgtccgcatcggcgccgaggtccgcgacggcgacatcctggtcggcaaggtcaccccg
aagggcgagaccgagctgaccccggaggagcggctgctccgcgcgatcttcggtgagaag
gcgcgcgaggttcgcgacacgtcgctgaaggtgccccacggtgagtccggcaaggtcatc
ggcatccgcgtgttctcccgcgaggacgacgacgagctgcccgccggcgtcaacgagttg
gtgcgcgtctacgtcgcgcagaagcgcaagatctccgacggcgacaagctggccggacgc
cacggcaacaagggcgtcatcggcaagatcctgcccgtcgaggacatgccgttcctgcct
gacggcaccccggtggacatcatcctgaacacccacggtgtgccgcgtcgtatgaacatc
ggccagatcctggaaacccacctcgggtgggtcgccaaggccggctggaacatccaggtg
gcagacggcggggcgggcgcagtgcccgactgggcgtcgaacctgcccgaggacctgctg
tcggcgccgtccgacagcatcgtcgccaccccggtgttcgacggtgcccgcgagaacgag
ctgtcgggcctgctcggctcgacgcttcccaaccgcgacggcgagacgatggtcaactcc
gacggcaaggcggtgctgttcgacggccgcagcggagagccgttcccgtacccggtgacg
gtcggctacatgtacatcctcaagctgcaccacctggtggacgacaagatccacgcccgc
tcgaccggtccgtactcgatgatcacccagcagccgctgggtggtaaggcgcagttcggt
ggtcagcggttcggcgagatggagtgctgggccatgcaggcctacggcgcggcctacacg
ctgcaggagctgttgaccatcaagtccgacgacaccgtcggccgggtcaaggtgtacgag
gcgatcgtcaagggcgagaacatccccgagccgggcatccccgagtcgttcaaggtgctg
ctcaaggagctgcagtcgctgtgcctcaacgtcgaggtgctgtcctcggacggcgccgcg
atcgagatgcgtgacggtgacgacgaggacctggagcgcgctgcggccaacctcggcatc
aacctgtcccgcaacgagtccgcgtcggttgaggatctcgcctga
DBGET
integrated database retrieval system
