Mycolicibacterium poriferae: MPOR_50130
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Entry
MPOR_50130 CDS
T07158
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mpof
Mycolicibacterium poriferae
Pathway
mpof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MPOR_50130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpof03400
]
MPOR_50130
Enzymes [BR:
mpof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MPOR_50130
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MPOR_50130
DNA repair and recombination proteins [BR:
mpof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MPOR_50130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
zf-TFIIB
NFACT_N
TMEM106_N
Motif
Other DBs
NCBI-ProteinID:
BBX53987
UniProt:
A0A6N4VK72
LinkDB
All DBs
Position
complement(5244997..5245878)
Genome browser
AA seq
293 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGLTVGRVDVGALSVLKTFDPPVSALAGQPVTAANRWGKYLG
MQAGDLHLITHLSRAGWLRWSDKLSAAPLKPGKGPIALRVHLSDPGGDDAGSAGVGFDLT
EAGTQKRLAVWLVTDPMAVPQIAALGPDALTLDPQGLAEALAGNTGRIKTVITDQKVIAG
IGNAYSDEILHVARLSPFATANKLTDAQLAALHDAMISVLTDAVTRSVGQQAATLKGEKR
AGLRVHARTGLPCPVCGDTVRDVSFADKSFQYCPTCQTGGKILADRRMSKLLK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaggtcgaagcgctcgccgaccacctgcgtcgccacgcggtcggg
ttgaccgtcggccgcgtcgacgtgggggcgctgtccgtgctcaagacgttcgacccgccg
gtgtccgcgctggccggtcaaccggtcaccgcggcgaaccgatggggtaagtacctcggc
atgcaggccggtgacctgcatctcatcactcacctgtcgagggccggatggttgcgctgg
tcggacaagctcagcgcagcgccgctcaagccgggtaaggggccgatcgcgttgcgggtg
cacctgagcgatccgggtggggacgacgccgggagtgccggtgtcggcttcgacctgacc
gaggccggtacccagaaacgtctcgcagtctggctggtcaccgatccgatggccgtaccc
cagatcgcggccctcggcccggatgcgctgacgctcgacccgcagggtctggccgaggcg
ctggcgggcaataccggccggatcaagaccgtcatcactgatcagaaggtgatcgccggg
atcggcaacgcatacagcgacgaaatcctgcacgtggcgcggctctcgccgttcgcgaca
gccaacaagctgaccgacgcgcagttggcggccctgcacgacgcgatgatctcggtgttg
accgacgcggtgaccaggtcggtgggccagcaggccgccacgctgaagggggagaagcgc
gcaggcctgcgcgtgcacgcccgcaccggcctgccatgcccggtgtgcggcgacaccgtg
cgcgacgtgtcgtttgccgacaagtcgttccagtactgcccgacctgtcagaccggcggc
aagatcctcgccgaccggcgcatgtccaaactgctgaagtag
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