Micromonas pusilla: MICPUCDRAFT_20852
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Entry
MICPUCDRAFT_20852 CDS
T02696
Symbol
JGI:MicpuC2_20852
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mpp
Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
03036 Chromosome and associated proteins [BR:
mpp03036
]
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
Enzymes [BR:
mpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
mRNA cycle factors
Common to processing body (P body) and stress granule
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
Spliceosome [BR:
mpp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
Chromosome and associated proteins [BR:
mpp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
MICPUCDRAFT_20852 (JGI:MicpuC2_20852)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
9687330
NCBI-ProteinID:
XP_003062102
JGI:
20852
UniProt:
C1N2K4
LinkDB
All DBs
Position
Unknown
AA seq
367 aa
AA seq
DB search
MRFPGDFDDVAGVRRVTPAKPRVVVLVPTRELAAQVALSARQLCFGTGHVVACLHGGQSV
KPQLEQLAFGPSILVSTPGRRPYVDLSRAKILIVDEADQMVDQGFEPQVAELVTDAGMPR
GSERQNLMFSATFPPGVKRLASALIAGDGLRRPSPSTVAVGRVGSTVAGIEQRIVLCADA
SRERKLDLLIAVLRAVPDARTLVFCSSKGTCAGFLFAAEELHGDCSQGARSRALDAFASG
AARVLVATDVASRGLDLPAVAHVINFDLPTDGRDFDAYVHRIGRTGRAGRDGIATSFYVP
GFGHDGNGPVYVALRELMAETDQSAPEWFQSCADAAGPPPGGRGYMRVGRGRGRGAGGGG
RGRGRGY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttccccggcgactttgacgacgtcgccggcgtccgacgcgtcacccccgcgaag
ccgcgcgtcgtcgtcctcgtcccgacgcgcgagctcgccgcgcaagtcgcgctatccgcg
cggcagctctgcttcgggaccggccacgtcgtcgcgtgtctccacggcgggcagagcgtg
aagccgcagctggagcagctcgcgttcgggccgtcgatcctcgtgtccacgccggggagg
cgcccgtacgtcgacctgtctcgcgcgaagattctgatcgtcgacgaggcggatcagatg
gtggaccaggggttcgagccgcaggtcgcggagctcgtgaccgacgccgggatgccgcgc
gggagcgagcggcagaacttgatgttcagcgcgacgttcccgccgggggtgaagcggctc
gcgagcgcgttgatcgccggcgacggattaaggcgcccgtcgccgtcgacggtcgcggtc
gggagggtcggcagcaccgtcgccgggatcgagcagcgcatcgtcctctgcgcggacgcg
tcgcgcgagcgcaagctggatctgttgatcgccgtcctgcgcgcggttccggacgcgcgg
acgctcgtgttttgttcgagcaagggtacgtgcgccggcttcttgttcgccgcggaggag
ctccacggcgactgctcgcagggcgcgcggtcgcgcgcgctcgacgcgttcgcctccggc
gccgcgcgcgtcctcgtcgccaccgacgtcgcctcgcgcggtttagacctccccgccgtc
gcgcacgtgatcaacttcgacctccccacggacggacgcgatttcgacgcgtacgtgcac
aggatcgggcgcacgggacgcgcggggcgcgacgggatcgcgacgtcgttttacgtcccc
gggttcggccacgacgggaacggcccggtgtacgtggcgttgcgggagctcatggcggag
acggaccagagcgcgccggagtggtttcagtcgtgcgcggacgcggcggggccgccgccg
ggagggcgggggtacatgcgcgtgggaagagggaggggaagaggggcgggaggaggcggg
cgcgggcgaggacgcggatactga
DBGET
integrated database retrieval system
