Micromonas pusilla: MICPUCDRAFT_21236
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Entry
MICPUCDRAFT_21236 CDS
T02696
Symbol
JGI:MicpuC2_21236
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
3.6.4.13
]
Organism
mpp
Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_21236 (JGI:MicpuC2_21236)
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_21236 (JGI:MicpuC2_21236)
03036 Chromosome and associated proteins [BR:
mpp03036
]
MICPUCDRAFT_21236 (JGI:MicpuC2_21236)
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MICPUCDRAFT_21236 (JGI:MicpuC2_21236)
mRNA cycle factors
Common to processing body (P body) and stress granule
MICPUCDRAFT_21236 (JGI:MicpuC2_21236)
Spliceosome [BR:
mpp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MICPUCDRAFT_21236 (JGI:MicpuC2_21236)
Chromosome and associated proteins [BR:
mpp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
MICPUCDRAFT_21236 (JGI:MicpuC2_21236)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
9688069
NCBI-ProteinID:
XP_003062389
JGI:
21236
UniProt:
C1N3K2
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MSGRGRGGRGGGRGGRGGGGRGGGGGGGGGRGRGGPPSAAGPAGGSSSGRGGPPGGRGGG
SGKDRRRAKQQATVDAKGAKEADANAVRAIESELFAGGQSSGIRFSDYAEVPVTRSGPGE
ESKGGPAALISFDVLGSNGGSNRRSIAVPKFLLDNVGRCKYASPTPIQAHAIPIALDAKN
DLMCCAQTGSGKTCGFLLPVIAKLGTGATTTPEGAAERAATPAALVMAPTRELAIQIHVE
ARRLAFDPAAMTSATALRAVVVYGGADAKAQLRELALGVDVLVATPGRLTDFVDRGVVSL
ARVKHLILDEADRMLDMGFEPQIRKIVLQRDMPPKHARQTLMFSATFPDSIQKLAREFLR
DYTWIGVGRVGSTVNAIAQHFELATCDKRHKLDLLIAALAKAPPPALTLVFVQKKRTAAW
VAGQLSKQHGVRAESIHGDRTQSQREAALASFKSGKAPVMVATDVAARGIDVPGVAHVVN
FDLPTAADDFDSYVHRIGRTGRAGREGMATSFFVPGFDPKTGNGKIASQIATLLREQKKE
APAFIANGGGGRAPAFVAAPGPATDARPAAMRGGGGRGGGGGGRGGGGGGGRGGGGGGGG
GRGGGGRGSGFGGGGGGGGGVSVFTSADAGGGRGGGRGGRGGRGGRGGARGGTGPPPPKV
QRT
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgagcggccgcggacgaggaggacgaggaggaggccgcggcggtcgcggaggcggcggg
agaggaggcggcggcggcggcggcggagggagaggacgcggaggaccgccgagcgctgcg
gggcccgcggggggatcgtcgtcgggccgcggggggccgcccggcgggagaggcggcggg
tccggcaaggaccgccgacgcgcgaagcagcaggccaccgtcgacgcgaagggcgccaag
gaggcggacgcgaacgcggtccgagccatcgaatcggagctcttcgcgggcgggcagtcg
tccgggatccggttctcggactacgcggaggtcccggtgacgcgctcagggccgggagag
gagagcaaaggcggtcccgccgcgctgatctcgttcgacgtcctcggatcgaacggagga
tcgaaccggcggtcgatcgccgtcccgaagtttctcctcgacaacgtcgggcggtgtaag
tacgcctcgccgacgccgatccaagcccacgcgatccccatcgcgctcgacgcgaagaac
gacctgatgtgctgcgcgcagacgggaagcgggaagacgtgcgggttcttactcccggtc
atcgcgaaactcgggacgggtgcgacgacgacgccggagggcgcggcagagcgcgcggcg
acgccggcggcgctcgtgatggcgccgacgcgcgagctcgcgattcagatccacgtcgaa
gcgcggcggctggcgttcgacccggcggcgatgacgagcgcgaccgcgctgcgcgcggtc
gtcgtctacggcggcgcggacgcgaaagcgcagctgcgagagctcgcgctcggcgtcgac
gtcctcgtcgcgacccccgggaggctcaccgatttcgtggaccgcggcgtcgtctcgctc
gcgcgggtgaagcatctgatcttggacgaggcggatcggatgctcgacatggggttcgag
ccgcagatacggaagatcgtgcttcagagggacatgccgccgaagcacgcgcggcagacg
ctcatgttcagcgcgacgtttccggattcgattcagaaattggcgcgggagttcttacgc
gactacacgtggatcggcgtggggcgcgtcgggagcacggtgaacgccatcgcgcagcac
ttcgagctcgcgacgtgcgacaagcgccacaagctagatctgctgatcgccgcgctcgcg
aaggcgccgccgccggcgctcacgctggttttcgtccaaaaaaaacgcaccgcggcgtgg
gtcgccggccagctgtcgaaacagcacggcgtcagggcggagtccatacacggcgaccgc
acgcagtcgcagcgcgaggccgcgctcgcgagcttcaagtccgggaaggcgcccgtgatg
gtcgccacggacgtcgccgcgcgagggatcgacgtcccgggcgtcgcgcacgtcgtcaac
tttgatctccccaccgccgcggacgacttcgactcgtacgtccacaggatcggacgcacg
gggcgcgcggggcgggaagggatggcgacgtcgttcttcgtgccggggtttgatccgaag
acggggaacgggaagatcgcgtcgcagatcgcgacgctgctgcgggagcagaagaaggag
gcgccggcattcatcgcgaacggcgggggaggacgcgcgcccgcgttcgtcgcggcgccg
ggacccgcgacggacgcgcggccggccgccatgcgcggcggcggcggaagaggtggcggc
ggcggcgggagaggcggcggcggcggagggggaagaggcggcggcgggggcgggggcggg
ggacgcggcggcggaggaagaggcagcggattcggcggcggcggcggcggcggcggcggc
gtctccgtgttcacgtccgccgacgccggcggcgggagaggcggcgggagaggcggacgc
ggcgggagaggcggacgcggcggcgccaggggcgggaccgggccgccgcctccgaaggtg
cagcgcacgtag
DBGET
integrated database retrieval system
