Microbacterium protaetiae: ET475_14420 Help Entry ET475_14420       CDS       T06575                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism mprt  Microbacterium protaetiae Pathway mprt03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:mprt00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     ET475_14420  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mprt03400]     ET475_14420 Enzymes [BR:mprt01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      ET475_14420 DNA repair and recombination proteins [BR:mprt03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      ET475_14420 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C DNA_primase_S RNA_ligase Motif Other DBs NCBI-ProteinID:  QAY61063 UniProt:  A0A4P6EHR5 LinkDB All DBs Position complement(3119693..3122188) Genome browser AA seq 831 aa AA seqDB search MGEERLVQIGGRRLRLSRLEKVLYPATGTTKGEVIDYYTRIAPLLLPHITGRPVTRKRWP EGVDHPPFFAKNLESGAPEWVHRLPIEHSTGAKDYPLVDDVPTLVYLAQVASLELHVPQW RFTPEGERARPDRLVLDLDPGPGVGLPECARVALWVREILSGMGLETFPVTSGSKGIHLY AGLDGSQTSEQASALAKELARLLEADHPDLVVSRMAKNLRADKVLLDWSQNNGSKTTIAP YSLRGRELPTVAAPRTWDELADPALTQLSFDEVLERAERIGDPMASLGFRAGGRAAASGP LSAYIAKRDAARTPEPVPDNPLAAATPVGQPPRFVIQEHHARRLHWDLRLEHDGVFVSWA VPRGVPPTAGRNSLAVMTEDHPLEYGSFEGTIPHGEYGGGTVTIWDDGRYDPEKWRDDEV IFTAHGRPGGPLGTVRLALIRTQGSGERSSWLLHRTKTDAEGRVQPDGQPVMPTEQADEP SAGGASRHRQTRDAAAATAPPATVPAPIGPAAVAPMLSTLARPAAARTAAGRWGAWAEMK WDGIRAVGVWDGASLRLFARRGTDITARYPELTAVDAGLSDEPAVVDGEIIALDASGRPS FPLLQRRMHLTAARQIEGERRRTPVRYHLFDVLAVSGTDLAGRALRERREVLESIAAHTI DEIVVPPVFDDVDEALATAARLQLEGIVVKDPASPYRRGVRSDQWLKVKLTRTQEVVIGG IRPGRGGRTGSIGSLLLGIPDENGLHYAGRVGSGFSESTLSRLMSVLEPLRCDSDPFVGV PAADARDAEWVRPELVGEVEFAEFTPGGILRQARWRGLRPDKTPAEVRRES NT seq 2496 nt NT seq  +upstreamnt  +downstreamnt atgggcgaggaacggctggtgcagatcgggggcagacgtctgcgtctgagccgcctcgag aaggtgctctaccccgccaccggcaccaccaagggcgaggtcatcgattactacacccgc atcgccccgctgctgctgccgcacatcaccggccgtccggtgacgcgcaagcggtggccc gagggcgtcgatcacccgccgttcttcgcgaagaatctcgagtcgggcgcaccggagtgg gtgcaccgactgccgatcgagcattccaccggggccaaggactaccccctcgtggacgac gtgcccactctcgtctatctcgcgcaggtggccagcctcgagctgcacgtgccgcagtgg cggttcacgcccgagggcgagcgagcccgccccgaccggctcgtgctcgacctcgacccc ggtccgggcgtcgggttgcccgagtgcgcgcgcgttgccctctgggtacgcgagatcctg tctgggatgggtctggagacgttcccggtcaccagtggcagcaagggcatccacctctac gcggggctggacggatcgcagacgagcgagcaggcctccgcgctggccaaagagctcgcc cgcctgttggaggccgaccaccccgacctcgtggtcagtcgcatggccaagaacctgcgg gccgacaaggtgctgctggattggagccagaacaacggcagcaagacgacgatagcgccg tactcactgcgcggccgcgaactgcccaccgtcgccgcaccccgcacctgggacgaactg gccgaccccgccctgacacagctgagcttcgacgaggtgctcgaacgggccgaacgcatc ggcgacccgatggcgagcctgggatttcgcgccggcgggcgggctgcggcatccggccca ctgtcggcctacatcgccaagcgcgacgcggcgcgcacgcccgagccggtgcccgacaat ccgctcgccgccgcgacgcccgtcggccagccgccgcgattcgtgatccaggaacaccat gcgcgtcggctgcactgggatctgcgtctggagcacgacggggtcttcgtcagctgggct gtgccccgcggagtaccgcccaccgccggccggaacagcctggccgtgatgaccgaggat caccccctggagtacggctcgttcgaaggcacgattccacacggcgagtacggcggcggc accgtcacgatctgggacgacggccggtacgaccccgagaaatggcgcgacgacgaggtc atcttcacagcgcacgggcgtccgggcggcccgctgggcaccgttcgtctggccctcatc cgcacccaggggtcgggcgagcgctcgagttggctgctgcatcgcaccaagaccgacgcc gaaggccgcgtgcagcccgacgggcaacccgtgatgccgaccgaacaggccgacgagccg tcggcgggcggtgcgtcccggcaccggcagacgcgggatgccgcagccgcgacggccccg ccggcaaccgtgcccgccccaatcggaccggcagccgtcgcgccgatgctctccacgctc gcacgaccggccgccgccagaacagccgccgggcggtggggcgcgtgggcggagatgaag tgggatggcatccgggccgtgggtgtgtgggatggcgcctcactgcggttgttcgcacgc cgtggcaccgacatcacggcgcgctaccccgagctgacggccgtcgatgccgggctctcg gacgaacccgccgtcgtcgacggcgagatcatcgcactcgacgcgtcgggccggccgagc ttcccgctgctgcagcgacgcatgcacttgaccgcggcccgccagatcgagggagaacgt cgccgcaccccggtgcgttatcacctcttcgacgtgctggctgtctcgggcacggacctc gccggccgtgcgctgcgtgagcggcgcgaggtgctcgagagcatcgccgcacacaccatc gacgagatcgtcgtgccacccgtgttcgacgacgtcgatgaagcattggccaccgcggcg cgcctgcagctggagggcatcgtcgtgaaagaccccgcctcgccctatcgtcgcggcgtg cgctccgaccagtggctgaaggtcaagctcacccgcacccaggaggtcgtgatcggcggc atccgtcccgggcgcgggggccgcaccggcagcatcgggtcgctgctgctgggcatcccc gacgagaacggcctgcactatgccgggcgcgtgggcagcggcttcagcgaatcgacgctg tctcgcctgatgagcgtgctggagccgcttcgctgcgacagcgacccgttcgtcggtgtt cccgccgccgacgcccgcgacgccgaatgggtgcgtcccgagctggtcggagaagtcgag ttcgccgagttcactcccggcggcatcctgcgccaagcgcgctggcgggggctgcggccc gacaagacgccggcggaggtgcgccgcgagtcctaa

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