Marinitoga piezophila: Marpi_1719
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Entry
Marpi_1719 CDS
T01665
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mpz
Marinitoga piezophila
Pathway
mpz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Marpi_1719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpz03021
]
Marpi_1719
03400 DNA repair and recombination proteins [BR:
mpz03400
]
Marpi_1719
Enzymes [BR:
mpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Marpi_1719
Transcription machinery [BR:
mpz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Marpi_1719
DNA repair and recombination proteins [BR:
mpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Marpi_1719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AEX86105
UniProt:
H2J5G1
LinkDB
All DBs
Position
1785562..1789170
Genome browser
AA seq
1202 aa
AA seq
DB search
MNTRVLKVGKRERHFFGKVKEDLNLYHDLLEIQLNSYEWFIKHGVKEVLDKYAPITVELK
GKRKAKISLEFTDVWIEDPLFEEMECKEKGLSYVVPLKAKIRITDHSTGEIIEPSDSLFF
GNIPKITDRSTFIINGAERVVVNQLVRSPGVYFVSEEQKSVKQTRPHFVAHFLPVKGAWL
EIIYNPNPGKDFLQIRIDRKRKFNYFLFLRALGYDSDLALLDLYPETISLNYDLTEYIER
GVTILSDIKVPEGSELYKETKTFRGVKLTEKIVEMLLDLNVTEIKVAHIVAQNTLEMFKK
SYESDGNLLTPEEAYKELFKKLRPGEIPRVNIATDYINNLYFNPNTFDFSLIGRKKIVNR
MGDVYRKYLIEVEGKDIDKSEDVEYPHKDEKTLTKLDLILASRHLLEMKNNPELLDTRDH
LGNKRVRSVGELMQIEFERSFSKMLPVLNEKLSIVQNIQKLNPNTLVNSRAIMTTINQFF
ATSQLSQFMDQVNPLSELTHKRRLSAIGPGGLKREHAKFEVRDVHHSHYGRMCPIETPEG
ANIGLITSLAILSRVDEFGFLETPYYKVKDGKVLYDKGVYWLTADQEEEKIIAPASVEID
ENGMIKAEYVEIRHAGKVTYVHREDVEFIAVTPKQIVSVSTSLIPFLEHDDANRALMGSN
MQRQAVPLMITEAPFVGTGVEWLAARDSGYVIKAKHRGKVSYVDAKTIIINRIDEEGNEI
LDKNGNPVQDKYTLWKFIRSNQDTTVNQRPIVEMGEVVEKGDPIADGPAIDMGELALGKN
VLVAFMPWEGYNFEDAILVNEELLERDTFTSLHIEVYETKAMDTQLGPEEITADIPNVKK
ESLRNLDENGIVRVGAYVTSGDILVGKVTPRGESETSPEEKLIRSVFGDRGKDVKDTSLT
VPHGIEGRVIDVKVYTRKDIPDLETGVNQYVKVYIASKKTLNVGDKLAGRHGNKGVVSNI
LRKEDMPFLPNGKPIEMILSPLGVPSRMNLGQVLEMHLGWLAKLTGRHFATPIFDGAKEY
EIMEELYKARKNNRMDELDAVRKEYGLDLGDDPKTESGKIVLRDGRTGEPFDYPIAIGYM
YMLRLVHIAKDKMHARSTGPYSLIHQQPLGGKAHFGGQRFGEMEVWALEAYGAAHTLTEM
LTYKSDDIKGRNEVYKAILNGKNLPDPGIPESFKVLVKELQGLMLDVRLYDEDGNELDVD
KL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacccgggtgttaaaagtgggtaaaagagaaaggcatttttttggtaaggtaaag
gaagatttaaacctttatcatgatttgttggagattcagcttaactcctatgaatggttt
attaaacatggagttaaagaggtgcttgataaatatgcaccaattaccgttgaattaaaa
gggaagagaaaagcaaaaatctcgcttgaatttacagatgtatggattgaagatccgctt
tttgaggaaatggaatgtaaggaaaaaggactttcttacgtagttcctctaaaagcaaaa
ataagaataacagatcacagtactggggaaatcattgaacccagtgattcgttatttttt
gggaatattccaaagattacagatagaagcacctttattatcaatggtgcggagagggta
gtagttaaccagcttgttagatcgcctggtgtatactttgttagtgaagaacaaaaaagc
gtgaaacaaacaagaccacattttgtagctcatttccttcctgtaaaaggggcatggctt
gaaataatatacaatccaaatccaggtaaagatttcttacaaattagaatcgatagaaaa
agaaaattcaattacttcctattcttaagggctttgggttacgactcagatttagctttg
ttagatctctatccagaaacaattagtttaaattatgatctaacagaatatattgaaaga
ggcgtaacaatcctttcagacataaaagttccagaaggctcagaattatacaaagaaaca
aaaacatttagaggagtaaaattaacagaaaaaatagttgaaatgctcttagatttaaat
gtaacagaaataaaagttgcacatattgtagcgcaaaatacacttgaaatgtttaaaaaa
tcatatgaatcagatggaaatttattaactcctgaagaagcttataaagaattattcaaa
aaactcagacctggtgaaattccaagagttaatatagctacagattacataaataatctc
tactttaatcctaatacattcgatttctcattaattggtagaaagaaaatcgtcaacaga
atgggcgatgtatacaggaaatatttaatagaagtagagggaaaagatatagataaaagt
gaagatgtagaatatcctcataaagatgaaaaaacattaacaaaactcgacttaattctt
gcatcaagacatttacttgaaatgaaaaataacccggaactccttgatacaagagatcat
cttggtaataaacgtgtaagatcagttggggaattaatgcaaattgaatttgaaagatca
ttctcaaaaatgcttcctgtgttgaatgaaaaattaagtatagttcaaaatatacaaaaa
ttaaatccaaatactctcgttaattcaagagctattatgacaacaataaatcaattcttt
gcaacaagtcagttatcgcagtttatggaccaggtaaatcccctttctgaattaacacat
aaaagaagattatcagcaataggtccgggcggtttaaagagagaacatgcaaagtttgaa
gttagggacgttcaccattcacattatggaagaatgtgtcctattgaaacaccagaaggt
gccaatatcggtttaattacttcattggcaattctttcaagggttgatgaatttggattc
cttgaaacaccatattataaagtaaaagatggtaaggttttatatgataaaggagtatat
tggttaactgcagatcaggaagaagaaaaaataattgctcctgcatctgttgaaatagat
gaaaatggaatgattaaagctgaatatgttgaaattaggcatgccggtaaagttacatat
gttcatagagaagatgtagaatttatagcagtaactccaaaacagattgtatctgtttca
acatcattaataccattccttgaacacgatgatgctaaccgtgcgttgatgggttcaaac
atgcagagacaggcagtacctttaatgattacagaagcaccatttgttgggacaggtgtt
gaatggttagcagcaagggattcaggttatgtaattaaggcaaaacatagaggaaaggtt
tcatacgtagatgctaaaacaataataataaatagaatagatgaagaaggaaatgaaata
ttagataaaaatggaaatccagttcaggacaaatatacattatggaaattcataagatca
aaccaggatacaacagtaaatcaaagaccaattgttgaaatgggtgaagttgtagaaaaa
ggagatccaattgcagatggtcctgcaatagatatgggagaattagcacttggtaaaaat
gttcttgtagcatttatgccatgggaaggatacaacttcgaagatgctatccttgttaat
gaagaactacttgaaagggatacatttacatcattacatatagaagtatatgaaacaaaa
gcaatggatacacaacttggtccagaagaaattacagcagatattcctaacgtaaagaaa
gagtcattaagaaacctcgatgaaaacggtattgtaagagttggtgcatatgtaacttca
ggtgatatacttgttggtaaagttacaccaagaggagaatcagaaacatcaccagaagaa
aaactcataagatccgtttttggagatagaggtaaggatgtaaaagatacatcattaaca
gtacctcatggaattgaaggtagagttattgatgttaaagtatatacaagaaaagatatt
ccagatttagaaacaggtgtaaatcaatacgtaaaagtttatatagcttcaaagaaaaca
ttaaatgttggagataaattggcagggcgtcacggtaataagggtgttgtttcaaacatc
ttgagaaaagaagatatgccattcctgccaaatggaaagccaattgaaatgatccttagt
cctttaggggttccatcacgtatgaaccttgggcaggttttagaaatgcaccttggttgg
ttagcaaaattaacaggaagacattttgcaacaccaatatttgatggtgcaaaagaatat
gaaataatggaagaattatataaagcaagaaaaaacaacagaatggacgaattagatgca
gttcgtaaagaatatggtcttgatcttggtgacgatccaaaaacagaaagtggaaagatc
gtattaagagatggaagaacaggagaaccatttgattatcctattgcaataggatatatg
tacatgttaagacttgtgcatattgcgaaagataaaatgcacgcacgttctacaggtcca
tattcattaattcaccagcaaccacttggaggtaaagctcactttggtggtcagagattt
ggtgaaatggaagtttgggctttggaagcatatggtgcagcacatacattaacagaaatg
cttacatacaaatcagatgatattaaaggaagaaatgaagtatataaagcaatcttaaat
ggtaagaatttacctgatcctggaattccagaaagtttcaaagttcttgtaaaggaatta
cagggattaatgctcgatgttcgtttgtatgatgaggacggtaacgaattagatgttgac
aaattataa
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integrated database retrieval system
