Methylobacterium radiotolerans: Mrad2831_1128
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Entry
Mrad2831_1128 CDS
T00674
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrd
Methylobacterium radiotolerans
Pathway
mrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mrad2831_1128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrd03019
]
Mrad2831_1128
03400 DNA repair and recombination proteins [BR:
mrd03400
]
Mrad2831_1128
Enzymes [BR:
mrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Mrad2831_1128
Messenger RNA biogenesis [BR:
mrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mrad2831_1128
DNA repair and recombination proteins [BR:
mrd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mrad2831_1128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACB23137
UniProt:
B1M1V2
LinkDB
All DBs
Position
complement(1188661..1190502)
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AA seq
613 aa
AA seq
DB search
MTRLDEARAALKKTFGYEDFRPGQDEVIGAVLDGTDVFAVMPTGSGKSMTYQLPALVDPG
LTVVVSPLIALMHDQVQQMRSVGIHAATLNSTVGESESRETWRALRSGDLRLLFVSPERL
LMDGCMDALRGAGVRRLAVDEAHCVSQWGHDFRPEYREIARARTALGNVQTLALTATADA
ATRAEIAERLFPQDRPPKIFVHSFDRPNIRLTFQPKDNPARQIERFLKHRRSESGIIYCS
SRKRTEQLAETLRKDGFDALPYHAGLDQATRMANQDRFLQEDGVVMTATVAFGMGINKPD
VRFVCHADMPNNVEGYYQEIGRAGRDGLPADTLTLYGLDDMALRRRQIDEKEISDDRRRV
ERRKLEAMITLCEGATCRRQSLLAYFGESSGACGRCDLCRGGVTLVDGTVPAQKILSAIV
RTGQRFGAAYICDVVHGKESDQIRRNGHASLKTFGVGADKPVAAWRAILRQLFAAGAIAE
NADGYGGLSMTEKGEAILFGREPVQLRPDPEPKAESRERRRAAAREDGEIALSEADEALF
QHLRGLRATLARAEGIAAFMVFPDRTLIEMARQKPVDLWALRTVHGVGERKREAYGDKFV
AAIADFLAHPPAA
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcctcgacgaggcccgcgccgcgctgaagaagacgttcggctacgaggatttt
cgccccggccaggacgaggtgatcggcgccgtgctcgacgggaccgacgtgttcgccgtg
atgcccacgggttcgggcaagtcgatgacctaccagctcccggccctggtcgacccgggg
ctgaccgtggtggtctcgccgctgatcgcgctgatgcacgatcaggtccagcagatgcgc
agcgtcggcatccacgccgcgaccctgaactcgacggtcggggaatccgagtcccgcgag
acgtggcgcgccctgcgctccggcgacctgcggttgctgttcgtctcccccgagcgcctg
ctgatggacggctgcatggacgccctgcgcggggccggcgtccggcggctggccgtcgac
gaggcccactgcgtctcgcagtgggggcacgatttccggcccgagtaccgggagatcgcc
cgcgcccggacggcgctgggcaacgtccagaccctggcgctcaccgccaccgccgacgcc
gcgacccgcgccgagatcgccgagcggctgttcccgcaggaccggccgccgaagatcttc
gtccattccttcgaccggccgaacatccggctgaccttccagccgaaggacaacccggcc
cggcagatcgagcggttcctgaagcaccggcgatcggagagcgggatcatctactgctcg
tcgcgcaagcgcaccgagcagctggccgagaccctccggaaggacgggttcgacgccctg
ccctaccatgccggcctcgaccaggcgacgcggatggcgaaccaggaccggttcctgcag
gaggacggggtggtgatgaccgccaccgtcgccttcggcatgggcatcaacaagccggac
gtgcgcttcgtctgccacgccgacatgcccaacaacgtcgagggctactaccaggagatc
ggccgcgccggccgcgacgggctgcccgccgacacgctgaccctgtacggcctcgacgac
atggcgctccgccgccgccagatcgacgagaaggagatctcggacgaccgccgccgggtc
gagcggcgcaagctcgaggcgatgatcaccctgtgcgagggcgcgacatgccgccgccag
tcgctgctcgcctatttcggcgagtcgagcggcgcttgcggccgctgcgacctgtgccgc
ggcggcgtgaccctcgtcgacgggaccgtaccggcccagaagatcctctcggcgatcgtg
cgcaccggccagcgcttcggcgcggcctatatctgcgacgtggtccacgggaaggagagc
gaccagatccgccgcaacggccacgcgagcctcaagaccttcggggtcggggcggacaag
ccggtggcggcctggcgggcgatcctgcgccagctcttcgcggccggggcgatcgccgag
aacgccgacggctacggcggcctgtccatgaccgagaagggcgaggcgatcctgttcggc
cgggagccggtccagctccgccccgacccggagccgaaggccgaatcccgcgagcgccgc
cgggccgccgcccgcgaggacggcgagatcgccctctcggaggccgacgaggcgctgttc
cagcacctgcggggcctgcgcgccacgctggcccgggccgagggcatcgcggccttcatg
gtcttcccggaccgcaccctcatcgagatggcccgccagaagcccgtcgacctctgggcg
ctgcgcaccgtgcacggcgtcggcgagcgcaagcgcgaggcctacggcgacaagttcgtg
gcggcgatcgccgattttctggcccatccgccggcggcgtga
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