KEGG   Muntiacus reevesi (Reeves' muntjac): 136166434
Entry
136166434         CDS       T10466                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
mree  Muntiacus reevesi (Reeves' muntjac)
Pathway
mree03013  Nucleocytoplasmic transport
mree04150  mTOR signaling pathway
mree05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mree00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    136166434 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    136166434 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    136166434 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mree03019]
    136166434 (SEH1L)
   04131 Membrane trafficking [BR:mree04131]
    136166434 (SEH1L)
Messenger RNA biogenesis [BR:mree03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     136166434 (SEH1L)
Membrane trafficking [BR:mree04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    136166434 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 136166434
NCBI-ProteinID: XP_065788698
LinkDB
Position
4:41221100..41243181
AA seq 421 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHAP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLLTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSIGSNIPSLQNSLNGSSGRYFFP
PLDSPRAGSRWSSYAQLLPPPPPPPLVEHSCDADTASLQYPHPRRRSLSRPLNPLPENEG
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgttcgtggcgcgcagtatcgcggcggaccacaaggatctcatccatgatgtgtctttc
gacttccacgggcggcggatggccacctgctccagcgaccagagcgtcaaggtctgggat
aaaagtgaaagtggggaatggcattgcactgctagctggaagacacatagtggatctgtg
tggcgtgtgacatgggcccatcctgagtttggtcaggttttggcttcctgttcttttgac
cgaacagctgctgtctgggaagaaatagtaggagaatcaaatgataaactgcgcggacag
agccactgggtcaagaggacaacgctggtggacagcagaacgtccgttaccgatgtgaaa
tttgctcctaagcatatgggtctcatgttagcaacatgttcagcagatgggatagttaga
atctatgaagctccagatgtcatgaatctcagccagtggtctctgcagcatgagatctca
tgcaagctcagctgtagttgtatttcttggaacccttcaagctctcgtgctcatgctccc
atgattgctgtaggaagtgatgacagtagtccaaatgcaatggccaaggttcagattttc
gaatacaatgaaaacaccaggaaatatgcaaaagctgaaactctcctgacggtcacagac
cctgtccacgatattgcctttgctccgaacttgggacgatctttccacattctcgccata
gcaaccaaagacgtgagaatttttacattaaagcctgtgaggaaagaacttacttcctct
ggtgggccaacaaaatttgaaatccatatcgtggctcagtttgataatcataattctcag
gtctggcgagtgagttggaatataacaggaacagtgctggcatcttcaggagacgatggc
tgtgtgaggttgtggaaagctaactatatggacaactggaagtgtactggcattctgaaa
ggtaatgggagccctgtcaatgggagttctcagcagggaaactcaaatccgtccataggt
tcaaatatcccaagtcttcagaattcactaaatggatcttctggcaggtatttctttccc
cctctggattccccacgggctggatcgagatggtccagttatgcccagctccttcctcct
cctcctcctcctcctctggtagagcactcttgcgatgctgacactgccagtctccagtat
cctcaccctcgcagacgatctctctctcggcctcttaatcccttacctgagaatgaaggg
gtttaa

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