Maioricimonas rarisocia: Mal4_41890
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Entry
Mal4_41890 CDS
T06940
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mri
Maioricimonas rarisocia
Pathway
mri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mal4_41890 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mri03021
]
Mal4_41890 (rpoB)
03400 DNA repair and recombination proteins [BR:
mri03400
]
Mal4_41890 (rpoB)
Enzymes [BR:
mri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mal4_41890 (rpoB)
Transcription machinery [BR:
mri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mal4_41890 (rpoB)
DNA repair and recombination proteins [BR:
mri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mal4_41890 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Kazrin
DUF6687
Motif
Other DBs
NCBI-ProteinID:
QDU39836
UniProt:
A0A517ZBH1
LinkDB
All DBs
Position
5537815..5541531
Genome browser
AA seq
1238 aa
AA seq
DB search
MPIPAERIIRAREVRNFGDIPGRFELSDLTRIQTESYARFLQLDKRPDQRKNHGLEEILR
EVFPIESYDGQYRLEYLRYELGKPRYTPMECRQLRLTYGRPFRIWLRLVKEQPVEEEVYL
GDIPIMVGGGEFIINGAERVIVSQLHRSPGVDFVLAGEPGERKNFSCRIIPERGSWIELV
VSKKGTLGVRIDQSGKFSAVTLIRAMNRDYSTDNALLRLFYDVHTEKVTKSNNAEALQGT
FAAEDVIYPPGHERCGEIIVECCEQITSTHAEEIAESGLKTVDVIKEVPDNLLLASVAED
TTASHEEALLKIYQRLRPGNPPQLEKAIDLFSEKFFDVNRYRLGRVGRFRINRKFEQDIS
DDEMTLKSEDFINAIRYLVRLRVGDPSAAVDDIDNLGNRRLRTIDELGADEIRKGFLKLR
RTVQERMSLKDVEEMTPRSLVNPKSVAAAIEYFYGRSELSQVVDQTNPLSMLTHERRLSA
LGPGGLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLSIFAKVDDYGFLITPYR
RVDNGKITDDFEWLRADEEANVYVAPADTRVVDGKIVDTRVLARYRNDVHWIEAGQVQYI
DVAASQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLVAEPPLVGTGLEDEIPRYSG
MVLRSDRNGKVTHVDGDSVEVEGKRFPLRKFHGLNERTCLNQKPVVELGQKVKKGDILCD
SAATRDGVLSLGRNVLVAFMSWEGYNFEDAIILSERLVKDDVYTSIHIDEFDVEIRETKL
GREEFTRDIPNVSEKALRHLDDDGIVHIGTRVAPGDILVGKVTPKAKTELTPEEKLLHAI
FGKAGEDVKNESLEVPSGVEGIVIHTEKFARRMSLSELDRKKYDQDLKKAEQEGQKKVAA
SFRNFLDQFEAVLDHPLTDDDGRELRSIDDDKFLADYANNFEQHVADLDIRSPQKQADIR
KLMKEQWSIVEDAMDDAEQRVNSMKRGDELPNGVLQMVKVYVASKRQISVGDKMAGRHGN
KGVISKVLPVEDMPYLEDGTPVDIVLNPLGVPSRMNVGQILETHLGWAASKLGFRAVCPV
FDGAPEEEINDLLDQAGLPRDGKAQLFDGRTGEAHEQKTTVGYIYMLKLHHLVDDKVHAR
ATGPYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGRTKIYE
SMVKGENTLEAGTPASFDVLNNEIRGLCLNLQLEKARV
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgccaatccctgccgaaagaatcattcgggctcgtgaagttcgtaacttcggtgacatc
cccggtcggttcgaactctcagatctgacgcggatccagaccgaatcttacgctcgcttc
ctccagctcgataaacgccccgaccagcggaagaaccacggactcgaagagatcctccgt
gaagtcttccccatcgaaagctacgacgggcagtatcgactcgagtacctccgctacgag
ctcggcaagccgcggtacacgccgatggagtgccggcagctccgcctgacctacggccgc
cccttccgcatctggctccgcctcgtcaaggagcagccggtcgaggaagaagtctacctc
ggcgacatcccgatcatggtcgggggtggcgagttcatcattaacggtgccgagcgcgtc
atcgtctctcagctgcaccgctcgccaggcgtcgacttcgtcctcgccggcgaacccggc
gaacgcaagaacttctcctgccggatcatccccgaacgcggcagctggatcgaactggtc
gtcagcaagaaggggacgctcggcgtccgtatcgaccagagcggaaagttctcggccgtc
acgctcatccgggccatgaaccgtgattactccacggacaatgccctgctgcgtctcttc
tacgacgtgcacaccgagaaggtcacgaaatcgaacaatgcggaagccctccagggaacc
ttcgctgccgaggacgtgatttacccgcccggacacgaacgctgcggcgaaatcatcgtc
gaatgctgcgagcagatcacctcgacacacgccgaggagatcgccgagtccggactcaag
accgtcgacgtcatcaaggaggttcccgacaacctcctgctggccagtgttgccgaagac
accaccgccagccacgaagaagctctgctcaagatttatcagcggcttcgccccggcaat
ccgccgcagctcgagaaggcgattgacctcttcagcgagaagttcttcgacgtcaaccgc
taccgactcggtcgcgtcggccgcttccgcatcaaccgcaagttcgagcaggacatctcg
gacgacgagatgacgctgaagtccgaggacttcatcaacgccatccgctacctcgtccgc
ctgcgtgtcggcgatccctccgcggcggtcgacgacatcgacaacctcggcaaccgccgt
cttcggacgatcgacgagctcggcgccgacgaaatccgcaagggcttcctcaagctccgc
cggaccgtccaggagcggatgagcctcaaggacgtcgaagagatgacgccgcgttcgctc
gtcaacccgaagagcgtcgccgccgccatcgagtacttctacggtcgcagtgagctctcg
caggtggtcgaccagacgaacccgctctcgatgctcacgcacgagcgtcgcctgagtgct
ctcggaccgggtggtctgaaccggaaacgtgccggcttcgaagtccgcgacgtgcacatt
tcgcactacggacgaatctgcccgattgaaacgcccgaaggtacgaacatcgggctcatt
tcgagcctgagcatcttcgccaaggtcgacgactatggcttcctgattacgccgtatcgc
cgcgtcgacaacggcaagatcaccgacgacttcgaatggctccgggccgacgaagaagcc
aacgtctacgtcgccccggccgatacccgcgtcgttgacggcaagatcgtcgacacccgc
gttctcgcccggtaccgcaacgacgtgcactggatcgaagccggccaggtgcagtacatc
gatgtggccgccagccagatggtcggcgtctcggccggtctgatccccttcctggaacac
gacgacgccaaccgcgccctgatgggttcgaacatgcagcggcaggccgtcccgcttctc
gtcgccgagccgcccctggtcggaaccggcctggaagacgagatcccgcggtactccggc
atggtgcttcgctccgaccgaaacggcaaggtcacccacgtcgacggcgactccgtcgag
gtggaaggcaagcggttcccgcttcgcaagttccacggactgaacgagcggacctgcctg
aaccagaagcccgtcgtcgaactcggccagaaggtcaagaagggggacatcctctgcgac
tctgccgccacccgcgacggcgtcctctccctcggccggaacgtgctggtcgccttcatg
tcgtgggaaggctacaacttcgaagatgccattatcctttccgagcgtctcgtcaaggac
gacgtctacacgtcgatccacatcgacgagttcgacgtcgagatccgcgagacgaaactc
ggtcgcgaagagttcactcgcgacattccgaacgtcagcgagaaagccctccgccacctc
gatgacgacggcatcgtccacatcggaacccgtgtcgctcccggcgacattctcgtcgga
aaggtcacccccaaggcgaagaccgaactgacgccggaagaaaaactgctccacgcgatc
ttcggcaaggccggcgaagacgtgaagaacgagtccctcgaggtccccagtggcgtcgaa
ggcatcgtcattcacaccgagaaattcgcccgccgcatgagtctctcggaactcgatcgc
aagaagtacgaccaggacctcaagaaggccgaacaggaaggccagaagaaggtcgccgcg
tcgttccgcaacttcctcgatcagttcgaggcggtcctcgaccatccgctgaccgacgat
gacggccgcgagcttcgcagcatcgacgacgacaagttcctcgccgactacgcgaacaac
ttcgagcagcacgtcgccgacctcgacatccgcagcccgcagaagcaggccgacatccgg
aagctgatgaaggagcagtggtcgatcgtcgaagacgccatggatgacgccgaacagcgc
gtcaacagcatgaagcgtggcgacgagcttcccaacggcgtgcttcagatggtcaaggtc
tacgtcgcctccaagcgacagatctccgtcggtgacaagatggccggtcgccacggtaac
aagggtgtgatctccaaagtactgccggtcgaggacatgccgtacctcgaagacggcacc
ccggtcgatatcgtcctcaacccgctgggcgttcccagccgtatgaacgtcggtcagatt
ctcgagacgcacctgggctgggcggcctccaagctcggctttcgggcagtctgccccgtc
ttcgatggtgcccccgaagaagagattaacgacctgctcgatcaggccggcctgccacgc
gacggtaaggcccagctgttcgacggtcggaccggtgaagcacacgagcagaagacgacc
gtcggttatatctacatgctcaagctgcaccacctcgtcgacgacaaggtgcacgctcgg
gccactggtccttactccctcatcacccagcagccgctgggtggtaaggcccgcttcggc
ggacagcggttcggagagatggaagtgtgggcactcgaagcctacggggccgcctacatc
ctccaggaactccttaccgtcaagagcgacgacgtcgagggacggaccaagatctacgaa
tccatggtgaagggcgagaacacgctcgaagccggcacccccgccagcttcgacgtcctc
aataacgaaatccgcggcctgtgcctgaatctccagcttgagaaggcacgcgtctga
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integrated database retrieval system
