Macrobrachium rosenbergii (giant freshwater prawn): 136855108
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Entry
136855108 CDS
T10429
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein para-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
mrj Macrobrachium rosenbergii (giant freshwater prawn)
Brite
KEGG Orthology (KO) [BR:
mrj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mrj04040
]
136855108
Ion channels [BR:
mrj04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
136855108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
SieB
HemY_N
Baculo_LEF-10
Motif
Other DBs
NCBI-GeneID:
136855108
NCBI-ProteinID:
XP_066988041
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All DBs
Position
30:complement(18548178..18737869)
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AA seq
2058 aa
AA seq
DB search
MSEESESLNEEERSVFRPFTRESLAAVEARIAEENAKRXELQKKKDEGEPVYDDDDDEGP
QADPNLEQGLPLPNRLQSQFPEDLVGTPLEDIDPFYHNQKTMIVVSKGKNIFRFSATDAV
FLLSPFNPVRRTAIFILIHPLFNFFIICTILTNCVLMIMPASETIESTEVIFTAIYTFES
GVKVMARGFILEGFTYLRDAWNWLDFIVISLAYVTMGIDLGNLAALRTFRVLRALKTVAI
VPGLKTIVGAVIESVRNLRDVIILTVFALSVFALLGLQIYMGVLTQKCIRKFDFTKENWT
FEELENFRKNETNWFNDGDGDYPLCGNSSGAGPCPAGYICIQGYGKNPNYGYTSFDSFGW
AFLSSFRLMTQDYWENLYQLVLRAAGPWHILFFVVIIFLGSYYLVNLILAIVAMSYDQLQ
KKAEEEEEAALAEEEALKELEAERAAAAEHALAIAGGELEQGSVIKSPSDFSCHSYELFV
DQPTANDDNREMSIKSEGGESINDPKARLNGIPPRKASLSLPGSPFTFRRGSRGSHQFAW
RTTNGRRFGDRKPLVLSTYLDAQEHLPYADDSAAVTPMSEENGAIIVPVYTNLGSRHNSY
TSHTSRISYTSHGDLINGKPLATKESQLLSRSRMASRVPELDNKMLRMLPLKLEGETLSK
KEDEVIDNIIREIFGPDINLEYIDKDASVQGTPLTRSKENVVDPSLEPEEVLAMKLKNPE
ANPFIDPIQKHTVVDMRDVMVLNDIIEQAAQQAGRQSRASDHGVSIYYFPAEEEEETLKE
KIKKKLIEFLGKIIDFFCVWDCCWVWIKFAQIVELIVFDPFVELFITLCIVVNTLFMAMD
HYGMNEGFENFLKNGNYFFTATFSIECFAKIIAMSPKYYLQEGWNIFDFIIVFLSLLELG
LANVSGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTVGALGNLTFVLCIIIFIFAVMG
MQLFGKNYTDNVVRFPKTPDGQLPRWNFTDFFHSIMIVFRVLCGEWIESMWDCLLVGDWP
CIPFFLATVVIGNLVVLNLFLALLLSSFGASNLSAPANDGETNKLAEAFDRIARFKAWIK
RSIFNFLKLIRAKLTNQISDQTPDSRDVDADDALMDRQGMKKLSKDHTQVDIPMDGLDLP
DGKIKNNAMMNNSKHIVNSITKDNGEIIENDYSNKQVVRLDEDDVSNNSLGSHKNRKLKS
DSGSHKGSSESLDDGEEKKDASKEDLEDDFQGSSGDEELLEDGEQRPPMMDTGSEIIMDF
PSDCFKESCYIKCPWFRGDPDSPFWQGWGHLRLKTYQLIENKYFETAVITMILLSSLALA
LEDVHLKTRPVLQDVLYYMDRIFTVIFFIEMLIKWVALGFAKYFTNAWCWLDFLIVMVSL
INLVATLAGAGKIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVGAIPSIVNVLLVCLI
FWLIFAIMGVQLFNGKYHKCMNDEGIRADAEEISGKDACLSANMSWENSEVHFDHVGMAY
LALFQVATWKGWIQIMNDAIDSTEIDRQPVREINIYMYLYFVFFIIFGSFFTLNLFIGVI
IDNFNEQKKKIRGSLEMFMTDDQKKYYAAMKKMGSKKPLKAIPRPQFRPQAVVFEIVTNK
KFDMIIMLFIGFNMLTMTIDHYKMSDEFTQVLDILNLIFICIFTSECVLKVFALRWHYFK
EPWNLFDFVVVIMSILGLVLKDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLF
ALAMSLPALFNICLLLFLVMFIFAIFGMSFFMNVKHTGGLDCVYNFETFFKSFILLFQMM
TSAGWDGVLSGIVNEKDCKLANPEIGEPGDCGNQVIGIAYLLGYLVISFLIVINMYIAVI
LENYSQATEDVEEGLTDDDYDMYYEIWQEFDPKGTQYIEFHKLSDFLDVLEPPLQIHKPN
KYKIVSMDIPICKGDLVFCVDVLDALTKDFFARKGNPVEEAADIGEIGPANDRPGYEPVS
STLWRQREEYCARLIQQAWRRHRQHKDQSSLSGADSQEELKQADTAVLVESDGYVTKNGH
KVVIHSRSPSVTSRSTDV
NT seq
6177 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaatcggagtccttaaacgaggaggaacgcagtgtttttcgcccgttcacc
cgagagagtctcgccgccgtcgaagctcgcatcgccgaggaaaatgccaaaaganccgaa
ttacaaaagaagaaggacgagggggagcctgtctatgatgacgacgacgatgagggaccg
caagcggaccccaacctggagcagggccttccgctccccaatcgccttcaaagccagttc
cccgaagatctggtcggtacccccctcgaggacatcgacccgttctatcacaaccaaaag
acgatgatcgtcgtgagcaagggcaagaacatcttccgattcagcgcgacagacgcggtg
tttctgctaagccctttcaacccagtgaggcggaccgccatcttcattctcatccatccc
ttattcaacttcttcatcatatgcaccattctcactaactgtgttctcatgatcatgcct
gcctccgagactatagagtctacagaagtcatcttcacagctatctacactttcgagtca
ggtgttaaagtgatggcaagaggatttatattagagggcttcacatatctaagggacgcg
tggaactggttggattttatagttatatcgttagcgtatgtgactatgggcatagacctt
ggtaatttggccgctttgagaaccttccgtgtgttgagagcgctcaaaaccgtggccatt
gtcccaggtctgaagacgatcgtgggcgctgtgatcgagtcagtcagaaatctgcgagat
gtgatcattttgaccgtcttcgcgctgtccgtgtttgccttacttggacttcagatttat
atgggagttctcacccagaagtgtatccgaaagtttgattttacaaaggaaaattggaca
ttcgaagaattagaaaactttcgcaaaaatgaaaccaattggttcaacgacggtgatggt
gattaccccttgtgcggcaacagtagtggtgcagggccgtgcccagctggttacatctgc
atccagggctacggcaagaacccgaactacggctacacgagcttcgatagtttcggctgg
gcgtttttgtcatcctttcgtctcatgacccaagattactgggaaaatttatatcaactg
gtgctccgtgcggctggcccttggcacatcctgttttttgtggttatcatcttcttgggt
tcttactacctggtgaacctcatcctggctattgtcgctatgtcttacgatcagttgcaa
aagaaggcagaagaagaagaggaggcagccttagcggaagaggaggcgctcaaggagtta
gaggcggagagagcagcggcagcggagcacgcgttagcaatagctggaggagagttggag
caagggtctgtcatcaagtcaccgtcggatttctcctgccactcgtacgagctcttcgta
gaccagccgactgccaacgacgacaaccgagagatgtccatcaagagcgagggaggagag
tccatcaacgacccgaaggcgcggctcaatgggataccgcccaggaaggcgagccttagc
ctgcctggctccccgttcacctttcggagagggtcgcggggtagccaccagttcgcctgg
cggactaccaacggccggcggttcggcgacaggaagcccctagtgctgtccacttacctg
gatgcccaggaacacctgccctacgcagacgactcggcggccgtgacgcccatgagcgag
gagaacggcgccatcatagtgcccgtctacacgaacttgggctcgcgccacaactcgtac
acctcccacacctccaggatatcctacacctcccacggggatctcatcaacgggaagccc
ctcgccaccaaggagtcccagctgctgtccagatcccgcatggcctcccgagtccccgag
ctggacaataaaatgctcaggatgcttccactcaaactggagggggagacactttctaag
aaggaagatgaagtcatagataacatcattcgggaaatatttggtcccgatatcaacctt
gagtatatcgacaaagatgcatcagtgcaaggcaccccgctcaccagatccaaagaaaat
gtggtagacccatccttggagccggaggaggttttggccatgaaactcaaaaacccggag
gcgaaccctttcatcgatcccattcagaaacacacagtagtcgatatgagagacgttatg
gtcctcaatgacatcatagaacaagcggcccaacaggcgggcagacaaagtcgggcgagc
gaccatggagtttccatctattatttccctgcagaagaggaggaggaaactcttaaggaa
aagatcaagaaaaaattgatagaattcttgggcaaaatcatcgactttttctgtgtttgg
gactgttgctgggtttggatcaagtttgcacagattgtagaactgatagtgttcgatcct
tttgtcgaactcttcatcactctgtgtatcgtcgtcaacaccctcttcatggccatggat
cactatggcatgaacgagggctttgaaaatttcctcaagaatggaaattacttcttcacg
gcgaccttcagtatcgagtgtttcgccaagattatcgccatgagccccaagtactacctg
caggagggctggaatatcttcgatttcatcatcgtgttcttatcactcctcgaactcggt
ctagccaacgtctctggtctctctgtcttgaggtcctttcgattgctgagagtgttcaaa
ctggcaaaatcttggccgaccctcaatttgctcatctctatcatgggtaagacagtaggt
gccctgggtaacctgacctttgtgttgtgcattatcatcttcatctttgccgtcatgggt
atgcagctcttcggcaaaaactacacagacaacgtcgtacgattcccaaaaacaccagat
gggcaactgcctcgttggaacttcaccgacttctttcactcgatcatgatcgtgttccgt
gtgctctgtggagagtggatcgaaagtatgtgggattgtctccttgtaggagattggccg
tgtataccgttcttcctcgccactgttgtcataggaaacttggtcgtgttgaatctgttc
ttggccttgctcttgagcagtttcggtgcttcgaatctgtccgctccggccaacgacggc
gaaactaacaagctagctgaagccttcgaccgtattgcccgcttcaaagcttggataaag
cgctccatattcaacttcctcaagcttatacgagccaagcttaccaatcaaatcagtgac
cagacgccagactctcgcgatgtggatgcagacgatgccctcatggaccgacagggtatg
aagaaactctccaaggaccacactcaggtcgacatccccatggacgggttggacctacca
gatggcaagatcaagaacaacgccatgatgaacaacagcaaacacatcgtcaactcgatc
acgaaggacaacggcgagatcatcgaaaacgactacagcaacaagcaggtggtgcggctg
gacgaggacgacgtcagcaacaactccctggggtcccacaagaaccggaagctgaagagc
gacagcggaagtcacaaaggatcctccgaatccttggacgacggcgaggagaagaaagat
gccagtaaggaggacctggaggatgatttccagggatcaagtggtgatgaggagctcctg
gaagatggtgagcaaaggccaccaatgatggacactggaagcgagatcatcatggacttc
ccttcagactgcttcaaggaatcatgctatattaagtgtccctggtttcggggtgatcct
gattctccattctggcaaggctggggccatctaagattgaagacataccaactgattgag
aacaaatattttgagacagctgtcatcaccatgattctgttgtcttctctggccttagcc
ctggaagatgtgcacctaaagacaagacctgtgcttcaagatgtattgtactacatggat
aggatcttcactgtaatattcttcattgagatgttgataaagtgggtggccctcggattc
gccaaatactttaccaacgcttggtgttggcttgactttctcattgtcatggtgtccttg
attaaccttgtggcaaccctggctggagcaggcaaaattcaggcattcaaaacgatgcga
acgcttcgcgcgctgcgtcccctgagggctatgtcccgtatgcagggcatgagggtggta
gtgaacgccttggtaggagctattccatccatcgtaaatgtgttactcgtgtgcctcatt
ttctggctcatctttgctatcatgggtgtacagcttttcaatggaaaatatcacaagtgc
atgaatgatgaaggcatcagagcggacgcagaagaaatatctggtaaagacgcatgcttg
tcagcaaacatgtcttgggagaacagtgaagtgcacttcgatcatgtagggatggcatac
ctcgctctcttccaggttgccacttggaagggttggattcagatcatgaatgatgccatt
gactccactgagattgacagacagccagtgagagagatcaacatttatatgtatctgtac
ttcgtctttttcatcatctttgggtctttcttcacactgaatctcttcattggtgtcatt
attgacaacttcaatgaacaaaagaaaaagataagagggtcgctcgagatgttcatgaca
gatgaccaaaagaaatactacgccgccatgaagaaaatgggctcaaagaaaccgcttaaa
gctatccctcgcccacagttccgccctcaagccgtagtgttcgagatcgtgactaacaag
aagttcgacatgatcattatgttgtttatcggtttcaacatgctcaccatgaccattgat
cactacaaaatgtcggacgagttcacccaagtcctagacatcttgaaccttatcttcatc
tgcatcttcacgtccgagtgtgtgctgaaggtcttcgccttgcggtggcactacttcaag
gagccctggaacctgtttgattttgtggtggtcatcatgtctatactgggtttggtgctg
aaggatatcatagagaaatactttgtctcacctacacttcttcgagtggttcgtgtagca
aaagtgggcagagtactccgattggtcaaaggtgccaagggcatcaggaccttgctcttt
gcattggctatgtccctccccgctctcttcaacatatgtctcctgcttttcctcgttatg
ttcatctttgccatatttgggatgtctttcttcatgaatgtcaaacacactggcggtttg
gattgtgtatacaactttgagacattcttcaagtctttcatcttgctgttccaaatgatg
acatcggcaggctgggatggtgtgctatcagggattgtcaatgagaaagactgtaagtta
gccaaccctgagattggagagccaggcgactgtggcaatcaggtcataggaattgcgtat
ctactgggttaccttgtcattagtttccttattgttattaacatgtacattgctgtcatt
ctcgagaattattcccaggccacagaagatgtagaagagggtctcacagatgatgactat
gacatgtactatgaaatatggcaagagtttgatcctaaaggcacacagtatattgaattc
cataaactatccgattttctggatgtactagagccgccacttcagattcacaagccaaat
aagtacaaaattgtatcaatggacattccaatatgcaagggagaccttgtgttctgtgtt
gatgttctagatgcactcaccaaggacttctttgccagaaaaggtaacccagtagaggag
gctgcggatataggtgaaattggtccagcaaatgatcgtcccggttatgaaccagtttca
tctacactgtggcgccagcgagaagaatattgtgcaaggctcatccaacaggcatggcgg
cgacatcgccagcataaagaccagtcatcattgtctggtgccgattcacaagaggaactc
aagcaagcagataccgccgtcctggtggaaagtgatggttatgtcacaaaaaacggacat
aaggtggtgattcactcgcgatcaccatcagtgacgtctcggtccaccgacgtgtga
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