Allomuricauda ruestringensis: Murru_2938
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Entry
Murru_2938 CDS
T01598
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mrs
Allomuricauda ruestringensis
Pathway
mrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Murru_2938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrs03019
]
Murru_2938
03400 DNA repair and recombination proteins [BR:
mrs03400
]
Murru_2938
Enzymes [BR:
mrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Murru_2938
Messenger RNA biogenesis [BR:
mrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Murru_2938
DNA repair and recombination proteins [BR:
mrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Murru_2938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Mnd1
Rrf2
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
AEM71960
UniProt:
G2PJL0
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All DBs
Position
complement(3238557..3240449)
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AA seq
630 aa
AA seq
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MHKDTTSILKEFWGHDDFRGSQKEIINNVLSGKDVLALMPTGGGKSICYQVPSLAMEGIC
IVVSPLVALIQDQVAQLKKRNIKAVALTGGIPPDELNDLLDNCLYGNYKFLYLSPERLQQ
TIVQERIPQMNVNLIAIDEAHCISQWGNDFRPAYLGCSILKELAPNKPMIALTATATPRV
VNDIVENLELENVAIFKDSFSRSNINFRVKRSEDKLYQFKKYMDKVPGSAIVYVRSRKMS
ISLANFLIKNGISASFFHGGIPKSDKEEKLNLWLSGKVRAMVATNAFGMGVDKPDVRLVV
HYHIPDSLESYFQEAGRAGRDGKPSTAIILTSKEDKDKAKQQFLSTLPDVAFVKKVYSKL
NNYFQISYGELITDPLAFKFNEFCKRYEFNPNMTFNAIRILDQNSVLSLAENFKEKTTLQ
FVASKSGIFEYLDKNRKTAPIIQTILRTYGGITEYETKINLYMLSKKTGASEEYLKQILQ
QLADDGIVEYQNNTSDLEITFLVPREDDHTINLFAKKIKDFNQVKQNNMAAMLGYISNKK
VCRSVYLLNYFGEKTAEKCGTCDICTKKEKIASPYDLEKRIMELLEIRPHSSRQLEKAIG
ANEKELLKTLERLLEDELISLNFKNEYIKK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtgcataaggacaccacaagcattttaaaagaattttggggtcatgatgatttcagagga
tcccaaaaggaaattataaataacgtactttctggcaaagacgttttggccttgatgccc
acaggtggtggtaaatccatttgctaccaagttccgtctttggccatggaaggcatctgt
attgtggtctcacctttggtggccctgattcaagatcaagtggcacaactaaagaaaagg
aacattaaagctgttgccctaactggcggcattcccccagatgagcttaatgatcttttg
gacaattgcctttatggcaactacaaattcctgtacctatcgccggaaagattgcaacaa
accattgtgcaggagcgcatcccacaaatgaatgttaatcttattgctattgatgaggcc
cattgtatatcgcaatggggaaacgattttagacccgcctatctcggatgttccatttta
aaagaactggctcccaataaaccgatgatcgccctaacggcaacggcgaccccacgagtg
gtaaacgacattgtggaaaacttggaattggaaaatgtagcgattttcaaagattctttc
tcccgctccaacattaattttagggtgaaacgttccgaggataaattgtatcagtttaaa
aaatacatggacaaggtccctggaagtgccattgtttatgttcgctccagaaaaatgtcc
atttccttggccaactttttaatcaagaatggtatttctgcttcattctttcatggtgga
attccaaaatccgataaagaagaaaaacttaacctttggttaagcggtaaagtaagggca
atggtggccaccaacgcttttggcatgggggtggataaacccgatgttcgtttagtagtc
cattatcatatacccgatagcttggaaagctattttcaagaagcaggaagagcgggacgg
gacggtaaaccatccacagccattattttaacttcaaaagaagacaaggataaagcaaag
caacagttcttgtctactttacccgatgtagccttcgttaaaaaagtatattccaaactc
aacaactatttccaaatatcgtatggtgaattgataacggacccattggccttcaaattc
aatgagttttgcaaacggtacgagtttaacccaaacatgacctttaatgccatccgtatt
ttggatcagaattccgttttatcgcttgctgaaaattttaaagagaaaaccacccttcag
tttgtagcctccaaatccggaatatttgaatatttggacaaaaacaggaaaaccgccccg
ataatacagacaattttgcgcacttatggaggcattaccgagtacgagaccaaaattaac
ctgtacatgttgtccaaaaaaactggggcaagcgaggagtacttaaaacaaatcctccag
caactcgccgacgatggcattgtggagtatcaaaacaataccagcgacctagagattact
tttttggtacctagggaagatgaccataccattaacctatttgccaaaaaaatcaaagat
ttcaatcaggtgaagcagaacaacatggcggccatgctgggttatatttccaataaaaag
gtatgccgtagtgtttacttgctgaattattttggagaaaagactgctgaaaagtgcggt
acatgcgatatttgtaccaagaaagaaaagatagcatctccctatgatttggagaaaaga
atcatggagcttttggaaattcgtccccacagttcccgacagttggaaaaagcaattggg
gcaaacgaaaaagaacttttaaaaacattggaaagactactggaagatgagctgatctcc
ctaaattttaagaatgagtacatcaaaaaataa
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