KEGG   Malassezia restricta: MRET_1893
Entry
MRET_1893         CDS       T06113                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
mrt  Malassezia restricta
Pathway
mrt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MRET_1893
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mrt03019]
    MRET_1893
Messenger RNA biogenesis [BR:mrt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MRET_1893
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MRET_1893
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind DUF3819 CNOT1_TTP_bind CNOT1_HEAT ARM_Cnot1 NOT1_connector BACK
Other DBs
NCBI-GeneID: 38738659
NCBI-ProteinID: XP_027484232
LinkDB
Position
III:complement(479217..485024)
AA seq 1935 aa
MSISTTVPGFDGIQVPLPMDLSGSSALFDAFLAHISDHASQEATPTQLTPLLVSILKADA
RVPFTLDHTQRQQLMGRLSDAFGETAALALGQALSQLPSKPLAEQLMDLGDALVTSSNLH
ALIKHSGFSRPKESDVSDLLAQLLSFTTRSMTFATNFSLLSKSLAATDSALDWRAIMRGL
DAMDSRVFLPCEKLGTALGDWIRGTPNPIESVNSLWGVWTNRTRQLQILYSLLLLSEHFS
MKDVTARQIVSPSDFVDAPPTIQAQAKVASESVWNSLDLIETLMELANSVTGAENSSEVG
RPVTAILERAIQTNAECVLLGLVVLPPSMNAVHTELVTKLLAMFLVGYSAHQLVFWHLWH
TQPALLMDAFKRLYAESPLHMTRIVEVAQELGMINQLVSQQPWAFALDAAALAARRDALQ
LEPWLEESISAAPADAHLITATLDFLEIKIKEDLMRRDPQAEPTFVPLHVQQVAVFLRVL
RGFGDSMSLPEIDHFKIVRNMCLQLHPRLMKLTPGPSSEPGLTVTTFSKDIHREADTWYR
QMYEEKVSVDDIVSLLRRCKHSDDERDHQLFACMVHTLFDEHRWFELYYPPRELLMTAAV
FGALVQYQLIESIPLGIAIRYVVDALQASPDSTLFHFGIQALLRFQKRLAEWPQLCQVLL
SLPTLTQTHPELIVVVNQALAAAKSGKVQPPDDSVFTAIQPDALPADMQRKPDEVQSDQL
LFLINNMSLANVHEKLSGARELVLPDILHWLARYLVLERVSLEPNNHDLYLMFLTGLEQP
RVFVYVLYETLTKLKALLDAEKTTQSTSERTVLKNLASWLGLTTLAQERPILHRNLAFKD
LLLQGYESGRLIVAIPFVCKVLEHCSSTRAFQPPNPWLMAILRLLVELYQFANLKLNLKF
EIEVLCKSLHVDLQKLEPSQLLPGRRPEPPSGPSTAAVAGKRAASGDHNTIVPGMEQLSV
NEPVAYHDMFVTMLQNMAQYIVISPQIVPYANSAAWKRVMYVALERAIQEIITPVVERSV
TIASISTRELVSKDFAMEPDEQKLRSAAHLMAQNMAGSLALVTCKEPLRLSILAHARTLF
AAGGVSEQALPEQALLLLVQDNLDLACVVIEKTAMEKALAKVDEGLANAYRTRRDFKMHG
HGAIFWDKASLSHYSTTLPDLMRIAPPGLQPAQLRVYEQLAMTPNVPRQEDDLEMDDVPA
VAGLNSMGMGSGFLMPTQALERFVLMAAELERFFAEVSETPQTLSTLPSTHFVRQVLPHL
NELILQSTHRDETVLLIAQKTVQLLYKTGTDLAREVWVAVLEQLCEQSSRVAREVTAWLM
YAEDERKFHVPVTLALVRANLISLVEQDQQLAKLLIRTQCRSSVVDYSAQLVRHCLQEGL
ATRAQFSTLLSALAQAVQYGRGTPAAQRLLDDLDELAVSESSVPLRDQLAYSFARWVRVF
QQSSNPEKSFIEYIMQLQSRHVLKGEEVSSLFFRMCTEVSVAHYTKQHAVGGTRASGIFS
PIDTFAQLIVYLIKYHADPSGTNDERAKVHYLTKILSIIVLVLAQSHEEMGAHFQQRPFF
RLFSSMLHGLRAAESSLQGAYNGALLAIANALYTLQPAFFPGFAFSWVALVSHRLFLPQL
LRGPTSSRAAFHRLMIAQLRFLSPLLRQNTLHDTTRLLYSSTLRLVLVLLHDFPEYLAEY
HQSLCDVIPSICIQLRNLVLCAYPRPLRMPDPFGAGLRLVTWPDPKFMPTMHYDAQAIVR
ALSPTPDVLERLDELVHTGQAPTGTGRMLADAFASPNAPDTGRYNEILINAAVLYVAHTT
LQSTKNHLLANRSVHDPLVELYHAVLPEIEPEGRYLMLSAAASQLRYPSHHTAYFHALFV
VLYTREEAFVREQILRVLLERVIVHRPHPWGLLYTFAQLLRTHSVPLPQAPPEIHAILEH
MSKMLAPERAVSASA
NT seq 5808 nt   +upstreamnt  +downstreamnt
atgtcgatcagcacgacggtacctggcttcgatggtatccaggtccctttgcccatggac
ttgagtggcagttcggcattgttcgacgcttttcttgcgcacatttctgatcatgcttct
caagaagcaacacctactcagttgacccctctcttggtgtccattctgaaagctgatgca
agggttcctttcacactcgatcatactcagcgccaacagcttatgggtcgtctctctgat
gcgtttggtgagacagctgccctcgcacttggtcaagccttgtcacaactcccatccaaa
cccctcgctgagcaattaatggatcttggtgatgctctcgtcactagctctaatctccat
gctctgatcaagcattcaggcttctcacggcccaaagagtcggacgtgtccgacctactg
gcccaacttctctcttttaccacaaggtctatgaccttcgccacaaacttttcattgctg
tcaaaatccctggcagccacagactcagcacttgactggcgtgccatcatgcgcggcctt
gatgccatggactcgcgcgtatttcttccctgcgaaaaacttggcacagccctgggcgac
tggatccgaggtacacccaatcccatcgagtctgttaattccctctggggcgtgtggaca
aacaggacacgccagttgcagattctctactccctcctcttgctcagtgaacacttttcg
atgaaagatgtcacggcacgtcagattgtatcaccaagcgactttgtggatgcaccacca
accattcaggcgcaggccaaagtagcctcagagagtgtttggaacagtctggatctaatc
gaaaccttaatggaactagccaacagcgtcaccggcgcagaaaacagcagcgaagttggt
cgccctgttacggccatcttggagcgcgcaattcagactaacgctgaatgcgtactgctc
ggactcgttgttctgcctccgtcgatgaatgctgtccacaccgaactggtaaccaagctg
cttgccatgttcttggtaggatactcggctcaccagcttgtgttttggcacttgtggcat
acccagccagccctactcatggatgcgtttaagcgcctgtacgctgagagccccttgcat
atgacccgcatcgtcgaagtcgcacaggagctaggtatgattaaccaactcgtttctcaa
cagccctgggcttttgctctggatgctgctgcactcgctgcacgccgagatgctcttcag
ctcgaaccgtggctggaagagtccatttctgcagcgccagctgatgctcacctcattacg
gcgacactcgactttcttgagataaaaataaaggaagatctcatgcgccgcgacccacag
gcagaacctacttttgtcccactacatgttcagcaggttgcggtgttcctacgtgtcctg
cgtggctttggtgactctatgtctctgccagaaattgaccactttaaaatcgtacggaat
atgtgtctgcagctgcatccgcgtctgatgaagctaacaccgggacctagctcagagcca
ggcctgacagttacgaccttttccaaagacatacatcgcgaagccgatacatggtatcgt
cagatgtatgaggaaaaagtgagtgttgacgatattgtttctttgttgcgtcgctgcaag
cattcagatgatgagcgtgatcaccagcttttcgcttgcatggttcatacgctgttcgat
gaacaccgctggttcgagctgtactacccgccacgtgaacttctcatgacggcggccgtt
tttggcgcattggtccagtaccagctgattgagtcgattccccttggtattgcaattcgc
tacgttgtggatgcattgcaagcttctccagattctacactctttcactttggtatccaa
gcgctccttcgtttccagaagcgcctggcagaatggccgcaactatgccaagtgcttctg
tcgctgccgactctaacacagacgcaccctgagcttattgtcgtggtaaatcaggcactc
gcagcggccaagagcggcaaagtacagccgccggatgacagtgtcttcactgccatccaa
cctgacgctcttcctgcggacatgcagcgcaagccagacgaagtccagtcggaccagctg
ctcttcctcatcaacaacatgtcgctggcaaatgtgcatgaaaaactgtccggcgcgcgg
gaactcgtcttgcctgacattttgcactggcttgcacgttacttggtgctggagcgtgtg
agtctagagcccaacaaccatgacttgtatcttatgttcctcacaggactggagcagcca
cgagtatttgtttatgtgctttatgagacgcttacgaagctcaaggctttgttggatgcg
gaaaagacgacgcaatcgacgtcagaacgtacggtgctcaagaacttggcgtcatggcta
ggccttactacactggcacaggagcgtcccattttacaccgcaatctggcttttaaagat
ctgctgctgcaaggttacgagtctggtcgtcttattgtcgcaattcccttcgtctgcaag
gtattggagcactgctcgagcacgcgggctttccaaccgcctaatccatggctaatggcg
atcctgcgtctgcttgtggagctgtaccagtttgcaaatctcaaactcaacttgaagttc
gaaattgaggttctttgtaagagtttgcacgtggatctccaaaaactcgagcctagtcag
ctattaccaggccgtcgtcctgagccaccgtctggcccgtctacggctgctgtggcgggt
aagagagcagcaagtggcgaccacaataccattgtgcctggcatggagcaactcagtgta
aacgagcctgtcgcgtaccatgacatgtttgtcacgatgctgcaaaatatggcgcagtac
attgtgatcagcccacagatcgtgccatatgccaacagcgcagcatggaagcgtgtcatg
tacgtggctcttgagcgtgctatccaggagatcatcacgcccgttgtcgagcgtagcgtc
actatcgcatcgatttcgacacgcgagcttgtgagcaaagacttcgccatggagccggat
gagcaaaaattacgatcggccgcgcaccttatggctcaaaacatggccggcagtctagct
cttgtgacctgcaaagagcctttgcggctgagcatccttgcacatgcgcgcacgctgttt
gccgctggcggggtatccgagcaagcactgcccgaacaggctctcctgctgctggtacag
gacaacttggacttggcatgcgttgtaattgagaagacggccatggaaaaggcattggcc
aaagtggacgagggcctggccaacgcctacaggactcgtcgcgactttaagatgcatggc
cacggcgccatcttttgggataaagcctcgctatcgcactacagcacgaccttgccagat
ctcatgcgtattgcaccacccggcctccagcctgctcagcttcgtgtctacgagcaactg
gcgatgacgcctaatgtgcctcgacaagaagacgaccttgaaatggatgatgtgccggcc
gtcgctggtctcaacagcatgggaatgggcagtggctttttgatgccgacgcaggcactt
gagcgtttcgtcctcatggctgcagaactggagcgtttctttgcagaggtgagcgaaacg
cctcagacactgtcgacgctgcccagtacccactttgtgcgacaggtcctgcctcacctg
aacgagcttattttgcagtcaacacatcgggacgagacggtgctgcttatcgcgcagaag
actgtgcagcttctctacaagacgggtactgatttagctcgcgaagtatgggtggctgtg
cttgagcaactgtgtgagcagtcctctcgtgtggctcgcgaagtaacagcttggcttatg
tacgccgaggacgaacgcaaattccatgtgccagtgactctggctcttgtccgtgccaat
ctcatcagtctcgtcgagcaagaccagcagcttgctaagctgctcatacggacccagtgc
cgatcctctgttgttgactacagtgcccagcttgttcgtcattgtctccaggagggtctt
gctacccgggcccagttttcgacgctgctgagcgcattggcacaggctgtgcaatacgga
cgtggcacaccagcagcacagcgcttgctcgatgatctcgacgaacttgctgtcagtgag
tcttcggttcctctgcgggaccagttggcatacagctttgctagatgggtgcgtgtgttc
cagcagtcgtcgaaccctgaaaagtccttcattgagtacatcatgcagctccagagccgc
catgtactcaagggtgaagaagtgtcgtcgctcttcttccgcatgtgcaccgaagtgtct
gtcgcacattacacaaagcagcacgcggttggcggcactcgtgccagtggcattttctca
ccgattgacacgtttgcacagttgatcgtgtacctgatcaagtatcatgcggacccgagc
ggtaccaacgatgagcgggctaaggtgcattatctgaccaagatattgtcgatcattgtg
ctagttcttgcccagtcgcatgaagaaatgggcgcccacttccagcagcggcccttcttc
cgtctcttttccagcatgttgcatggtctgcgtgcggctgagtcgtcgctacaaggcgcc
tataatggcgctctgctcgccattgcgaatgctttgtacacattacaacccgcctttttc
ccaggctttgccttctcgtgggttgctcttgtctctcaccgcctctttctcccgcagctc
ctgcgggggccaacatctagccgggctgcgttccatcgtctcatgatcgctcaactgcgt
ttcctttcgccgttgctgcgtcagaacacgctgcatgacaccacacgtctgctgtactca
tcaacgcttcgcttggtgctcgtactcctgcacgactttccggagtatctcgctgagtac
catcagagtctgtgtgacgtcattccatcgatttgcatccagttgcgcaatcttgtgctc
tgcgcttatcctcgcccgctgcgtatgcccgatccgtttggtgcaggcctgcgtcttgtg
acgtggcctgatcccaaattcatgccgactatgcactatgatgctcaggctattgtgcgt
gctttatcgcccacgcctgatgtccttgagcgtctcgatgaacttgtgcataccgggcag
gctccaaccggcactggtcgcatgttggctgatgcgtttgcatcgccaaatgctccggac
actggtcgttacaacgagattttgatcaatgcagctgtgctttatgtggcccatactaca
ctgcaaagcacgaaaaaccatttgttggccaaccgctccgtgcatgatcctcttgtcgag
ctgtatcatgctgtgctgccagaaatcgagccggagggtcgttacctgatgctcagtgct
gcagccagtcagctgcgatacccatcgcaccacactgcgtacttccatgcattgtttgtt
gttctctacactagagaagaggcattcgtgcgcgagcagattctgcgtgtgctattggag
cgtgtcattgtgcaccgcccacacccatggggactcctctacacattcgcgcagctcttg
cgcacgcactctgtgccgctgccgcaagccccacctgagattcacgctattctcgaacac
atgtccaaaatgctcgcaccagagcgtgccgtatctgcttctgcatag

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