Mauremys reevesii (Reeves's turtle): 120384181
Help
Entry
120384181 CDS
T07797
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120384181 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrv03019
]
120384181 (EDC4)
Messenger RNA biogenesis [BR:
mrv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120384181 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
120384181 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_HPS5
Beta-prop_THOC3
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
NBCH_WD40
EIF3I
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
120384181
NCBI-ProteinID:
XP_039358465
LinkDB
All DBs
Position
LG16:5833406..5888797
Genome browser
AA seq
1401 aa
AA seq
DB search
MASASIDIEDATQHLRDILKLDRPAGSVNENQRPPNSFNGDLNGLLVPDPVAAGDGAPLA
KPMLRTVPLGTLQEKQVICLSGDDSSTCVVISAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNSYLAYAIRGASNGSAMVRVLSISTAERTLLKGFTGGVADL
AFAHLNSNQLACLDEAGNLFVWCLAMDNGKIQEEILVNIKRPEGTPLNSFRRIIWCPFIP
DENEESGEEGSQTLALLHEDRAEVWDLDIIRANNSSWPVEVTNIKEGFIVVKGHSTCLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSKSVPPSLKACLDLSAEFLI
LSDVQRKVLYVMELLQNQEEGRAYFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPAEE
ESDSLSTEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPEMAAPIPPHSSHE
DFAFPDHLADLGTEGLGSEKGSVHGSQPDLRRIADLPVPADFLALSNDAKPKLMTPDAFM
TPSTSLQQIAMSPGSSVSSLTAVTAMSSASVTDPAVPRPSEDLTLSPKMQLDTSLTLSSS
GSSLQTSPRNHSVLIPGLPDKLTPKAPVPVTPANPPLALELQEVEPLVVAQASPTRERSP
DVISSASTAMSQDIPEIASETLQRSFAAAPAGLPAEVLEPNHHADSMASAASALHLLSPR
NRHSSEHSQHSLDMAPVEVDRLTTPSLLETALTQENASSNSVVSQPWPAAPDITRETRNS
IADSPRDDVAEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKASA
QRLPVKDWKAKVSPRASPKLKRKGKKDDGDVTQSPRSCDRQVSAECQDELMSLLRSQQRE
LTELRQNQMELMQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDRALTEGQQRNGQLQ
EHLSQQLSQSLSTAACNRLERTIREEMKKTVPQCISKSLDPVTGQLSNTIAAKLTAVEGT
LKENVTKLVKSKNLTDAIARAAADALQGPIQSAYREAFQSVVLPAFEKSCQSMFQQINDT
FKQGTQEYIQQLETHMKNKKAREQEARDSLLGQLRQLISTFQSSTDQLASTITTSVHTEV
QHQLHVIVGNMQDSILTQVQRVIKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPIPSAHLD
FQAQQTHVLQLLQQGCLNQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVLLS
LIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMNQVRQKLFQFLQAEPHNT
LSKPARRLMIMLQGLVTPSMT
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgccagcatcgacatcgaggacgcgacccagcatctgagggacatcctcaag
ctggaccggccggcaggttcagtgaatgaaaaccagaggccacccaactcgttcaacggg
gacttgaatgggctgctggtgccagaccccgttgcagctggagatggagctcccttggct
aagccaatgctccgaactgttcctctgggaaccctgcaggagaagcaagtcatctgcctt
tctggagatgacagctccacctgcgtggtgatatcggcaaaagacgtggagattgtggcc
agcagtgactctagcatcaccagtaaggccagaggaagcaacaaggtaaaaatacagcca
gtagccaggtatgactgggagcagaaatactactatggcaacctgatagctgtatcaaac
tcctacctggcatatgccattagaggtgccagtaatggctctgctatggtgcgggtgctg
agcatcagcactgccgagcggaccttgctgaaaggattcacgggcggcgtggcagacctg
gctttcgcccatctcaactccaaccagctggcctgcctggatgaggctggcaacctcttt
gtctggtgcctggccatggacaatgggaaaatccaagaggagatcctggtgaacataaaa
cgacctgagggcaccccgctgaacagcttccggagaatcatatggtgccccttcatccca
gatgagaatgaggagagcggtgaagagggcagccaaacattggcattgctgcacgaggac
agggcagaggtttgggatctggatattatccgagccaacaacagttcctggccggtggag
gtgactaacatcaaagagggcttcattgtggtgaaaggccacagcacgtgcctgagcgag
ggagcgctctcgccagatgggaccgtcttggccacagcaagccacgacggctatgtcaaa
ttctggcagatctacatagaggggcaagatgagccaaggtgcctgcatgaatggaagccc
catgacggcaggccgctctcctgcctgctcttctgtgataatcacaaaaaacaagacccg
gaggttcctttctggaggtttctcatcactggagcggatcagaaccgagagctgaagatg
tggtgcacagtttcttggacctgtctgcaaactgtccgcttttcccctgacatcttcagt
tccaagagcgttcccccgagtctgaaagcctgcctggacctctctgccgaattcctgata
ctgagcgacgtgcagagaaaagtcctgtatgtgatggagcttttgcagaaccaggaggag
ggcagagcttacttcagctccatctcggagttcctcctcacccacccggtcctgagcttc
ggcatccaggtggtgagccgctgccggctgcggcacacggaggtcctcccagctgaagag
gaaagcgacagcctgagcacagaaggtgctcagggggctggagctgtcgaatcggcggcg
ggtgtgctcatcaagctcttctgcgtccacaccaaggccctgcaggatgtgcagatccga
ttccaacctcttcatagtccagagatggctgcaccgatccctccccacagctcccatgaa
gattttgcgtttccagaccatctggctgacttgggcacagaagggctgggatcggagaag
gggtccgtccatggctcccaaccagacttacggcgcattgcagacctgcctgtgccagcg
gattttcttgccctctccaacgatgccaaacccaagctgatgaccccagatgcgttcatg
accccaagcacatctcttcagcagattgccatgtcgcccggaagcagcgtcagttccctg
actgcagtgacagccatgagcagcgcttccgtcactgaccctgctgtgcccaggccatct
gaggacctgactttgagcccaaagatgcagttggacaccagcctcacgctgagcagcagt
ggcagcagtctccagacaagtcctaggaaccattcagtccttatccctggactccctgac
aagctgaccccgaaggcccctgtcccggtcactccagcaaacccccctctggctctggag
ctgcaggaagtggagccccttgtggtagcccaggcctcacccacccgtgagcgctccccg
gacgtcatttcctcagcctccacggccatgtcccaggatatcccagagatcgcctccgag
acgctgcagcgcagctttgccgccgccccggccgggctccctgcagaggtgctggagccc
aaccaccatgcggacagcatggcctcagccgcctcggccttgcacttgctgtccccgagg
aaccggcacagctccgagcacagccagcactccctggacatggcccccgtggaggtggac
aggctgaccacaccctcgttactggagacggctttaactcaggaaaatgcatcttccaac
agcgtcgtgagccagccgtggccagcagcccccgacatcaccagggaaacccggaacagc
atagcagacagcccaagggatgacgttgcagagaagcacaagagctcttcctatcacagg
cacagctaccacctgctgcagcacgacagccaggatgccagtgcggagcaaagtgaccat
gacgatgaagttgcaagtttggcgtctacatcaggtgggtttggtgccaaagcatctgca
cagcggctgcctgtgaaggactggaaagccaaggtgtctcctcgggcttcgcccaagctc
aaacggaagggcaagaaagatgacggggatgtgacccagtccccgaggtcatgtgatcgc
caggtgagcgccgagtgccaggatgagctgatgtctctgctgcggagccaacagagggag
ctcacggagctgagacagaaccagatggaactaatgcagagactcactgaccacctggat
gctgtgcagagctccctcatgggtcacatggaacgagtgattgattcgcagcaagaacaa
gagcagcggaggctggaccgagctctgacagaggggcagcagcggaacgggcagctccag
gagcacctgtcccagcagctctcgcagtccctctccactgctgcgtgcaatcgcctggag
aggaccatccgcgaggagatgaagaagacggtgccccagtgcatttccaagagcctggac
cctgtcactggccagctgagcaatacgattgctgccaagctcacggccgtcgaggggaca
ctgaaggaaaacgtcaccaagctagtgaaatcaaagaacctgacagatgccattgcgagg
gcagcggcggatgccctgcaggggcccatccagtcggcatacagggaggcgttccagagc
gttgtgttgccagcgtttgagaagagctgccagtccatgttccagcaaatcaacgacacc
ttcaagcaggggacgcaggaatatatccagcagctcgagactcacatgaagaacaagaag
gcgcgagagcaggaggcccgagactccttgcttggccagctccggcagctgatcagcacc
ttccagagcagcacagatcagctggcctccaccatcaccaccagcgtgcacaccgaggtg
cagcatcagctgcacgtcattgtgggcaacatgcaggactctattctgacccaggtgcag
agggtcatcaagggagaggtgagcctggccatgaaggagcagcaagcggccgtcacctcg
agcatcatgcaggcgatgcgctctgcagcaggcacgcccatcccctctgctcacctggac
ttccaggctcagcagactcacgtcctgcagctgctgcagcagggctgcctcaaccaggct
ttccagcaggctctcacggcagctgatctgaacctggtcctatacgtctgtgagacggtg
gatcctcagcaggtgtttggacagcacccatgtccgctctcccagcccgtcctcctgtct
ctcattcagcagctctcctcggatctgggcacccgtaccgaactgaaactgaattacctg
gaggaggcagtgatgcacctggaccacagcgaccccatcacccgagaccacatggggtcg
gtcatgaaccaggtgcggcagaagctcttccagttcctgcaggcggagccccacaacacc
ctgagcaagccagcccgtcgcctcatgatcatgcttcagggcttggtcacccccagcatg
acctaa
DBGET
integrated database retrieval system
