Mauremys reevesii (Reeves's turtle): 120387093
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Entry
120387093 CDS
T07797
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Pathway
mrv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120387093 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrv03400
]
120387093 (LIG3)
Enzymes [BR:
mrv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
120387093 (LIG3)
DNA repair and recombination proteins [BR:
mrv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
120387093 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
120387093
NCBI-ProteinID:
XP_039363218
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All DBs
Position
LG20:5290191..5318133
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AA seq
998 aa
AA seq
DB search
MPAVFKILFSQTARTLSRREGLCLPQRQACLLRFESCLLGLPVANPFTWYQLLVRNKSLL
SASRSRGACAEDFAVPSALHVWHRRRCTVPDEMAEQRYCVDYAKRGTAGCKKCKEKILKG
MVRIGKVVPNPFTESGGEMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDPEKD
MINQHISEATSKAANTPKKKATIQAKLSPSGQITSPKKELLATPNPSPKKFSGFTAKPGN
SDEVPESSPHKSSLSAKKCDPKHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLQKGTA
GDGFHGDLYLTIKLLLPGVIKSVYNLNDKQIVKLFSRIFNCSQEEMVRDLEQGDVSETVR
IFFEESKSCPPAAKSLLTIQEVDEFLTQLSKLSKEDEQQSVLQDIASRCTGNDLKCIIRL
IKHDLKMNAGAKHVLDALDPNAYEAFKASRNLQNVVERVLRNQQETEKLPGLKRTLSVQA
SLMTPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLP
HKVAHFKDFIPQAFPGGHSMILDAEVLLIDNKAGKPLPFGTLGVHKKAAFQDANVCLFVF
DCIYFNETSLMDRPLRERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMINRVIREGLE
GLVLKDIKSTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGC
YDPKSQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPD
PKKAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLPQLKELYQLSKEK
SDFNIIVAEEEGSTASSSGENEGNSRSSTPHKIAKTPPSKSPAKTKKPEGSKAVGRSPQK
KAEEKRGEKRKAAELDDNRKKTLLDIFTGVKLYLPPSVEDFSKIRRYFVAYDGDLVQEFD
TASATHVIGDVDENPGAKRVSPDWIWECIRKRRLVAPC
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgttttcaagatcctcttctcgcagactgccaggacactaagcagaagggaa
ggactttgcttgccccagagacaggcttgtctactgagatttgaaagttgccttctgggt
ctccctgtggccaacccatttacttggtaccagttgctagtaagaaataagtctctcctt
tctgccagcagaagccggggagcttgtgctgaagactttgctgttccttcagctttgcat
gtttggcatcgtaggcgctgcacagtccctgatgagatggcggagcagaggtactgcgtg
gactacgccaagcgcggcacagccggctgcaagaaatgtaaggagaagatcttgaagggg
atggtgcgcattgggaaggtggtccccaaccccttcacagagtcaggcggggagatgaag
gagtggtaccatgtgaagtgcatttttgagaagctagagagggctcgagccacaacaaag
aagattgaggacatcacagacttggagggttgggaagagctccaggatccggagaaagat
atgataaaccagcatatctcagaggccacttccaaggcggcgaacacacctaagaaaaag
gcgactatccaggcaaagctctcccccagtggacagataaccagtcccaagaaggagcta
ctagctacccccaatccatcaccaaagaaattctctggcttcacagctaaaccgggcaat
tctgatgaagtccctgaaagctctccccacaagtctagcctctctgcaaagaagtgtgac
ccaaagcacaaagattgcttgctgcgggagttcagaaagttgtgcgccatggttgccgag
aagcccagctataacgtgaagacgcagatcattcaggacttcttgcaaaaaggaactgcg
ggagatggcttccatggtgacctctacctgactattaagctgctcttaccgggtgtcatt
aaaagtgtttacaacttgaatgacaagcagattgtcaagctgttcagcaggattttcaat
tgcagccaggaggagatggtccgagacctagagcagggagatgtttccgaaactgtgcgc
atcttttttgaagagagcaagtcctgccctcctgctgccaaaagtctcctcaccatccag
gaggtggatgagttcctcactcaactttcaaagctttccaaggaggacgagcagcaaagt
gtgctgcaggatatcgctagcaggtgcacagggaatgacctgaaatgcatcatccggcta
ataaagcatgatctgaaaatgaatgctggtgcaaagcacgtgttggatgctttagatcct
aatgcttatgaggcattcaaagcctcacgcaatctccagaatgtggtggagcgagtcctg
aggaaccagcaggagactgagaagttgccaggtctgaagcgaaccctcagcgtgcaggcc
tcactgatgacccctgttcagcccatgctggctgaagcctgcaagtcaatcgaatatgcc
atgaagaagtgccccaatgggatgtatgcagagatcaaatacgatggggaacgagttcag
gtccacaagaatggagatcacttcagctacttcagccgaagcctcaaacccgtcctccct
cacaaagtagcccattttaaggacttcatcccccaggctttccctggtggacatagtatg
atcctggatgcggaagttcttctgattgacaacaaagccggcaaaccgctccccttcggg
acccttggagtgcataagaaagctgctttccaggatgccaatgtctgcttgttcgtgttt
gactgcatctatttcaatgagaccagcctgatggacaggcccctgcgtgagcgtcgaaag
tttctccatgataacatggtggaaatccccaaccggatactcttctccgagatgaagcat
gtcacaaaagcttcagatctggcagatatgatcaatcgagtcatccgcgaggggctggaa
ggactggtgctgaaagatataaagagtacgtatgagcctggtaaacgtcactggctaaaa
gtgaaaaaggactatctgaatgaaggtgccatggctgacacggcagacctggtggttctg
ggagctttctatggacaaggcagtaaaggtgggatgatgtccattttcctcatgggctgc
tatgaccccaagagccagaaatggtgcacggtgacaaagtgcgctggtgggcacgatgat
gccaccctggctcggctgcagaaggagctggacatggtgaagatcagcaaggatcccagt
aaaattccaagctggctgaaaattaacaagatctattatccagacttcattgttccagac
ccaaagaaagccccagtgtgggagatcacaggtgctgagttctctaaagcagaagcccac
actgcagatgggatctccatccgcttccctcgctgcacccggatccgagatgacaaagac
tggaagacagccaccaacctccctcagctcaaggagctgtaccagctctccaaggagaag
tctgatttcaatatcattgtagcagaggaggaggggtccacagccagcagcagtggcgag
aatgagggaaattctaggtcttccacaccccacaaaattgctaagacccccccaagcaag
tcgcctgcaaaaaccaagaagccagaaggcagcaaagcagttggtcggtccccccagaag
aaggcggaggagaagcgaggggagaaacggaaagcagctgagctggatgacaacagaaag
aagacgctgctggacatatttacaggggtgaagctgtacctaccgccatccgtggaggac
ttcagcaaaatccgccggtactttgtggcgtatgacggagaccttgtgcaagagttcgac
accgcctcagcaacacacgtaataggggacgttgatgagaaccctggagccaaacgcgtg
tctcctgactggatctgggagtgtatccggaaacggaggctagtggccccctgttaa
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