Marinobacterium rhizophilum: KDW95_21395
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Entry
KDW95_21395 CDS
T08609
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
mrz
Marinobacterium rhizophilum
Pathway
mrz02024
Quorum sensing
mrz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KDW95_21395 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KDW95_21395 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrz03019
]
KDW95_21395 (hfq)
03036 Chromosome and associated proteins [BR:
mrz03036
]
KDW95_21395 (hfq)
Messenger RNA biogenesis [BR:
mrz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KDW95_21395 (hfq)
Chromosome and associated proteins [BR:
mrz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
KDW95_21395 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
UTW11775
UniProt:
A0ABY5HHE5
LinkDB
All DBs
Position
4751247..4751486
Genome browser
AA seq
79 aa
AA seq
DB search
MSKGQSLQDPYLNVLRKERVPVSIFLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARPVKLPQADEKQPD
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcagtctttacaagacccttatctaaacgttctgcgcaaggagcgtgtg
ccggtttcgattttcctggtgaatggtatcaagctgcagggacagatcgagtctttcgat
cagttcgtgattctgcttaagaataccgtcagccagatggtctacaagcatgcgatatct
acagtcgttcctgcccgtccggtgaaactgccgcaggccgacgagaagcagccggactga
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