Micromonospora sagamiensis: GCM10017556_04910
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Entry
GCM10017556_04910 CDS
T06946
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag00040
Pentose and glucuronate interconversions
msag01100
Metabolic pathways
msag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GCM10017556_04910
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10017556_04910
Enzymes [BR:
msag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GCM10017556_04910
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
BCL12752
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All DBs
Position
complement(636935..638944)
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AA seq
669 aa
AA seq
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MTTSSAPPRPPRWRHHAAAGLITALTLSATALPQPAVAAPGAAVPTPVAPAVTATPDGFA
SVNALGQNGTTGGAGGPVVTVTTAAQFLDYISRPGPYVVQVSGTITLPTGTSDGMHNVAS
DKTIVGLGANATLSGGGLNIGVPVDDDVTSPPANAVHNIIIRNLHLTGATDDLVNVQMFS
HHIWIDHNEFSNGDDGAVDIKRGSDFVTVSWNHFHDHDKTLLLGHDDDNAAQDVGRLRVT
YHHNWFDASDQRNPRVRFSALAHVYNNYYDDNSYGVVSTNDSAVLVENNYFYSVNNPGRV
DFSGPLGRIVERGNILVACNHPIETRGTVPDPRTYYPYTLDPAANVPTIVPAGAGVGRIS
PTSDPTAAAAATAAGPGVTAQPDGFASVDALGQNGTTGGVGGPVVTATNASDFLEYIDTV
GPMIIQVTGRIQISSKQGVRPNKTIIGVGNAEITGGGLDFYRSYNVIVRNINFTDAEDDA
INVGQNSHHIWIDHNRFAGAVDGSVDIVRGADYVTVSWNHFDHSDKSMLIGHSDGSGSTD
IGHLKVSIHHNFFDNSRQRHPRIRFAEPVHVYNNYFLGNELYGIASTENAGVVVEGNYFR
DVPHPMYSASGYADSGPGRAVQRNNVFVNSGTPETAGTVTEPRTYYPYTLDSAANVPALV
TAGAGVGRI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacctccagcgcaccgccccgcccgccccgatggcggcaccacgccgccgccggt
ctgatcaccgccctcaccctgtccgccaccgccctgccgcagccggccgtggcggcaccg
ggcgcggccgtccccaccccggtcgccccggccgtcaccgcaacgcccgacggcttcgcc
agcgtcaacgccctcggccagaacggcaccaccggcggtgccggtggaccggtggtcacc
gtcaccaccgccgcccagttcctggactacatctcccgccccgggccgtacgtcgtccag
gtctccggcaccatcacgctgcccaccgggaccagcgacgggatgcacaacgtcgcctcc
gacaagaccatcgtcgggctcggcgcgaacgccaccctctccggcggcgggctgaacatc
ggcgtaccggtcgacgacgacgtcacgtcgcccccggcgaacgccgtgcacaacatcatc
atccggaacctgcacctcaccggggcgaccgacgacctggtcaacgttcagatgttctcg
caccacatctggatcgaccacaacgagttctccaacggcgacgacggcgcggtcgacatc
aaacgcggttccgacttcgtgaccgtctcctggaaccacttccacgaccacgacaagacg
ttgctgctcggccacgacgacgacaacgcggcgcaggacgtcggccggttgcgggtcacc
taccaccacaactggttcgacgcatcggaccagcggaacccacgggtgcgcttctccgcg
ctggcccacgtctacaacaactactacgacgacaacagttacggcgtggtctccaccaac
gactcggccgtgctggtggagaacaactacttctacagcgtcaacaacccgggccgggtc
gacttcagcggaccgctgggccggatcgtcgagcgcggcaacatcctggtcgcctgcaac
cacccgatcgagacgcggggcaccgtgcccgacccgcgcacgtactacccgtacaccctg
gacccggcggcgaacgtgccgacgatcgtcccggccggcgccggggtcggccggatctca
ccgacctcggatccgaccgccgccgccgccgcgaccgccgccggccctggggtcaccgcc
cagccggacggcttcgccagcgtcgacgccctcggtcagaacggcaccacgggtggggtc
ggcggcccggtggtcaccgcgacgaacgcgtcggacttcctggagtacatcgacaccgtc
ggcccgatgatcatccaggtcaccggtcggatccagatcagcagcaagcagggcgtccgc
ccgaacaagaccatcatcggcgtcgggaacgccgagatcaccggtggtggcctggacttc
taccggtcgtacaacgtgatcgtccggaacatcaacttcaccgatgccgaggacgacgcg
atcaatgtcgggcagaactcgcaccacatctggatcgaccacaatcggttcgccggcgcg
gtggacggctcggtggacatcgtccggggcgcggactacgtgaccgtctcctggaaccac
ttcgaccactccgacaagagcatgctgatcggccactccgacgggtccgggtccaccgac
atcgggcacctgaaggtgagcatccaccacaacttcttcgacaacagccgacagcggcac
ccgcgcatccgcttcgccgagccggtgcacgtctacaacaactacttcctcggcaacgag
ctgtacgggatcgcctccaccgagaacgccggggtcgtcgtggagggcaactacttccgc
gacgtaccgcacccgatgtactcggccagcggctatgccgacagtggtccgggtcgggcg
gtgcagcgcaacaacgtcttcgtcaactcgggtaccccggagaccgccggtacggtgacc
gagccgcggacgtactacccgtacaccctcgactctgcggcgaacgtgcccgccctggtg
accgccggtgccggcgtgggccggatctga
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