Micromonospora sagamiensis: GCM10017556_41040
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Entry
GCM10017556_41040 CDS
T06946
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msag
Micromonospora sagamiensis
Pathway
msag00040
Pentose and glucuronate interconversions
msag01100
Metabolic pathways
msag02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
msag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GCM10017556_41040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10017556_41040
Enzymes [BR:
msag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GCM10017556_41040
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
BCL16365
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Position
complement(4671547..4672545)
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AA seq
332 aa
AA seq
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MLAGRRRLTLLATTAGATAALVTAGMLTSVTAQASPTAGPDSAPQATSTALVGWATQNGG
TTGGGSAPTTTVTSASALTSALGSSSAAVIRVSGTISCSGMLRVRSNKTILGNSGATISG
CGFNISGDRNVIIRNLTFRGWNDDAINVQESATNIWVDHNTFTGGYDGAVDIKRGSDFIT
VSWNRVYNHDKSMLLGHSDDNASQDRGHLRVTYHHNWFDASTQRHPRVRFGNPVHVYNNY
YYNNSGYGVASTEGAGVLVEGNYFENVDDPYHLGEGDSGPGTLVARNNHFVNSGSGQAGG
SVASIPYGYTLDTPSSVKSIVTAGAGAGRISV
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcaggacggcgtcgcctgacgctgctcgccaccaccgccggcgccaccgcggcg
ctggtcaccgccgggatgctcacctccgtcaccgcccaggccagccccaccgccggcccg
gattccgcaccgcaggccacctcgaccgccctggtcggctgggcgacccagaacggcggc
accaccggcggcgggagcgccccgacgaccacggtcaccagcgcctcggcgctgaccagc
gccctcggctccagcagcgccgcggtgatccgggtctccggcacgatctcctgctccgga
atgctgcgggtccggtcgaacaagaccatcctcggcaactccggcgcgaccatctcgggg
tgcggtttcaacatcagcggtgaccgcaacgtcatcatccggaacctgaccttccggggc
tggaacgacgacgcgatcaacgtccaggagtcggccacgaacatctgggtcgaccacaac
accttcaccggcggctacgacggcgcggtcgacatcaagcgcgggtcggacttcatcacc
gtgtcgtggaaccgggtctacaaccacgacaagtcgatgctgctcgggcacagcgacgac
aacgccagccaggaccggggtcacctgcgggtgacctaccaccacaactggttcgacgcc
agcacgcagcgccacccccgggtgcgcttcggcaacccggtgcacgtctacaacaactac
tactacaacaacagcggctacggcgtggcgtccaccgagggcgccggcgtgctcgtcgag
ggcaactacttcgagaacgtcgacgacccgtaccacctcggtgagggcgactccgggccg
ggcaccctggtcgcccggaacaaccacttcgtcaactcgggcagcgggcaggccggcggc
agcgtcgccagcatcccgtacggctacacgctggacacgccgagcagcgtcaagtcgatc
gtcaccgccggcgcgggtgccggccggatctcggtctga
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