Metamycoplasma salivarium: NCTC10113_01145
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Entry
NCTC10113_01145 CDS
T07316
Symbol
rpoB_2
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
msai
Metamycoplasma salivarium
Pathway
msai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
msai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10113_01145 (rpoB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msai03021
]
NCTC10113_01145 (rpoB_2)
03400 DNA repair and recombination proteins [BR:
msai03400
]
NCTC10113_01145 (rpoB_2)
Enzymes [BR:
msai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10113_01145 (rpoB_2)
Transcription machinery [BR:
msai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10113_01145 (rpoB_2)
DNA repair and recombination proteins [BR:
msai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10113_01145 (rpoB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
CAD7361047
UniProt:
A0A7R9GPA6
LinkDB
All DBs
Position
1:complement(214059..217658)
Genome browser
AA seq
1199 aa
AA seq
DB search
MTQNSKYEVRKFGPTTLRRDYSISQKKFDTPDFLEMQRVSVEKFIKEDIENELRNIYPIE
AAGKVRIDYLHNTAKFEVPKKSEFDCIREAKKKGSTYVGKLKAKLRQTNIQTGEVEEAEV
VFAEIPIMTYGGSFFINGSEKVIVSQLIRSTGAYFGVGVRNKQANDLFNKVEIIPQLGSW
VEIYHKVTSATPDSVKITIDKNKSFYLTIFLKALGFTKAGIYTMFGKNNVLKETFKRDKI
YVEDGNIEKITQEAQEAIYRLIRKGDRMTAESVKNLIPLTLFNARRYNLTETGRFTLNRK
LNVIERILNSYLACDLYSKDGELLHEKGKFIDFNLAKQIHKEFEMGIIPMWRLPDVEESV
YGSQLEVEGNDKLHIRLYVPKVEIYPTENDMNEDKKVIVLGNDPTSDEHFLIVPDIIATI
SYYFNLLENVGVDDDPDSLINKRIVTIGELLQYQFRVGLIKLEKNTKERIATKDLEKITP
KNVTNNKPIFNQFKSFFNTSKLSQFMDQCNPLAEISNKRRITSLGPRGLNRDTAQFEVRD
VHPTHYGRICPIETPEGPNIGLILNLASFAQIDKYGFIQTPYFKVNNRKVDFSKPHYLTA
IEEMGMVIAQSTVKIENNIIIDDVVMARKNNEYVEANADDIDYIGVSNRQMISIAASAIP
FLENDDANRALMGANMQRQAVPVIKPEAPLVATGVEADIAKFSSTNIRSNTDGIVTYVDA
TQIKIMPFEGKKADTYYLRTFERSNQGTLIHQIPLVKVGQEIKKGDLLVDGPSMKDGEMA
LGRNVLVGFSTWHGYNYEDAVVLSERLVKDDVYTSIHIEEQTIQFRHSKAGEDILTSDIP
NASNYSKRFLNEDGIVRIGSEVTAGDILVGRTSPKGEDNPTPEEKLMAAIFGQKSVNRKD
TSLKVKHGHNGTVVAVEVLTREFGDQLEDGIEKIVKVSIAQKRKIRVGDKMAGRHGNKGV
VSIVLPVEDMPYLEDGTPLDIVLNPQGVPSRMNIGQILELHLGLAAKKLGVKFVTPVFDG
ITHNQIKEILEEAKVDTSGKTYVYDGQTGEKFDHPISVGIMYYLKLYHMVDDKMHSRSVG
PYSLITQQPLGGKSQNGGQRFGEMETWAIESYGAANVLQELLTYKSDNIIGRNQLYNALA
KGTKLPKPGMPESFNVLAYELRGLGIKLEAHEKNEHGEVDENDLRVDTKYYQEIEGSGE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaattcaaaatatgaagttagaaaatttggtcctacaactctaagacgcgat
tattctatttcacaaaaaaaattcgatactcctgactttttggaaatgcaaagagtatca
gttgaaaaatttattaaagaagatattgaaaatgaacttagaaatatctatccaattgaa
gccgctggaaaagtaagaattgactatttgcataacactgcaaaatttgaagttcctaaa
aaatcagaatttgattgtatcagagaagctaagaaaaaaggttcaacctatgttggaaaa
ttaaaagcaaaattaagacaaactaacattcaaactggtgaagttgaagaagcggaagtt
gtttttgcagaaattcctattatgacctatggtggttcatttttcattaatggttcggaa
aaagttattgtttcacaacttattcgttcaactggtgcttattttggtgttggagttaga
aataaacaagcaaatgacttatttaacaaagttgaaattattccacaactaggttcatga
gttgaaatttatcataaagtaacatcagcaacacctgattctgtaaaaattacaattgat
aaaaataaatcattttatttaacaattttcttaaaagcattagggtttaccaaagctgga
atttatacaatgtttggaaaaaacaatgtacttaaagaaacatttaaacgtgacaaaatt
tatgttgaagatggcaatattgaaaaaattacccaagaagcacaagaagcaatctaccgt
ttaattagaaaaggtgatcggatgactgctgaaagtgttaagaatttaattcctttaaca
ttattcaatgctagaagatacaatctaacagaaactggtagatttacattaaaccgtaaa
ttaaatgttattgaaagaattttaaattcatatcttgcatgtgatttatattcaaaagat
ggtgaacttttacatgaaaaaggtaaatttattgattttaatttagctaaacaaattcac
aaagaatttgaaatgggaattatcccaatgtgacgtttacctgatgttgaagaatcagtt
tatggttcacaacttgaagttgaaggtaatgacaaattacatattagattatatgttcct
aaagttgaaatttatcctactgaaaatgatatgaatgaagataaaaaagttattgtttta
ggaaatgatcctacttctgatgaacattttttaattgttcctgatattattgcaacaatt
tcatattatttcaatttattagaaaatgttggcgttgatgatgacccagactcattaatt
aacaaaagaattgtgacaattggtgaacttttacaatatcaatttagagttggacttatt
aaactagaaaaaaatactaaagaaagaattgcaactaaagatctagaaaaaattacacct
aaaaatgtaactaacaacaaacctatctttaaccaatttaaatcattctttaatacttca
aaactttcacaatttatggatcaatgtaatccattagctgaaatttcaaacaaacgtaga
atcacatcattaggacctagaggtcttaaccgtgatactgcacaatttgaagttcgggat
gttcacccaactcattatggaagaatttgtcctattgaaactcccgaagggccaaacatt
ggacttatcttaaacttagcttcgtttgctcaaattgataaatatggatttattcaaact
ccatatttcaaagttaataatagaaaagttgatttttctaaacctcattatttaacagcg
attgaagaaatgggaatggttattgcacaatcaactgtcaaaattgaaaataatattatt
attgacgatgttgttatggctagaaaaaataatgaatatgttgaggcaaatgctgatgat
attgattatattggtgtttcaaaccgtcaaatgatttcgattgcagcttctgcaattcca
tttttggaaaatgatgatgctaaccgtgcgcttatgggtgcaaacatgcaacgtcaagca
gttcctgttattaaaccagaagctccattagtagcaactggtgttgaagctgatattgca
aaattctcatcaactaatattaggtcaaatactgatggtattgttacttacgttgatgca
actcaaattaaaattatgccttttgaaggcaaaaaagcagacacttactatctaaggaca
tttgaaagatcaaaccaaggaactttaattcatcaaattcctttggttaaagttggtcaa
gaaattaaaaaaggcgatttacttgttgatggtccatctatgaaagatggtgaaatggct
ttaggtagaaatgttttagttggattttcaacttgacatggatataattatgaagatgct
gttgttttatcagaaagattagttaaagatgatgtttatacttcaattcacattgaagaa
caaaccattcaatttagacactcaaaagctggtgaagatattctaacttcagacattcca
aatgcttcaaattattcaaagagatttttaaatgaagatggaattgttagaatcggttct
gaagtaacagcaggagatattttagtaggtcgtacttctcctaaaggtgaagacaaccca
actcctgaagaaaaacttatggctgcaatttttggacaaaaatcagttaatcgtaaagac
acatcactaaaagtaaaacatggtcataatggaactgttgttgcagttgaagttttaact
cgtgaatttggtgaccaactagaagatggtattgaaaaaattgtcaaagtttcaattgca
caaaaacgtaagattagagtcggcgacaagatggctggacgtcatggaaataaaggtgtt
gtttcaattgttctacctgttgaagatatgccttatttagaagatggaactcctcttgat
attgttttaaacccacaaggtgttccttcacgtatgaacataggtcaaatcttagaatta
cacttaggacttgctgctaaaaaattgggtgttaaattcgtaactcctgtttttgatgga
attactcataaccaaattaaagaaattttagaagaagctaaagttgatacatctggaaaa
acttatgtttatgatggccaaactggagaaaaatttgaccacccaatttctgttggaatt
atgtattatctaaaactttaccacatggttgatgacaaaatgcactcacgttcagttggc
ccttactcattaattactcaacaaccacttggtggaaagagtcaaaatggtggtcaaaga
tttggtgaaatggaaacatgagctattgaatcttacggtgcagcaaatgtcttacaagaa
ctattaacttacaaatcagataatattattggaagaaaccaactatataatgctttagct
aaaggcacaaaattaccaaaacctggtatgcctgaatcatttaacgttttagcttacgaa
cttagaggattaggaatcaaattggaagctcatgaaaaaaatgaacatggcgaagttgat
gaaaatgatcttcgtgttgatactaaatactatcaagaaattgaagggagtggagaataa
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