Micropterus salmoides (largemouth bass): 119886035
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Entry
119886035 CDS
T07309
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119886035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119886035
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
msam03310
]
119886035
Transcription factors [BR:
msam03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
119886035
Nuclear receptors [BR:
msam03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
119886035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119886035
NCBI-ProteinID:
XP_038552431
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MPCVQTQYASLPHDTYFSSEFLNADLSAKLMMDISGQKDQLSTSSLPSINTLVGNGYMGE
FDAYSCKITTSPPASTVSFSHDAVAESSCPQMQSQAFKLDDLQVYGCYPGSFALSCLDET
LSSCGSDYYGSPVYAATSPATPGFQSQSAPVWDSPFSPYPSAPQSSVADKAAMAQQLSFF
TFSPAPGQLSPLGQHQDALPGHEDPFFLSPQQHVSPIHCPPMSLEHVPLESPRMLEGAMT
SPKTHNPGSSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKDCPVDK
RRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKTVAEASSTTPSVNIIASLV
RAHLDSNPTLEKLDYSKYQETVDNLKEKEDAGDIQQFYDLLTSTLDVIRNWAETIPGFTD
FCTEDQELLLESSFVELFILRLAYRSNPEKNKLIFCNGVVLHRLQCVRSFGDWIDSIMDF
SQNLHRMNLDISLFACLSALVIITDRHGLKEPKRVEDFQNHLITSLREHMSGNGSESSQT
QPNYLSRLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVEKIFLDTLPF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgtacaaacccagtatgcatccctgccccatgacacctacttcagctctgag
ttcttgaacgctgacctcagtgccaaactgatgatggacataagtggccaaaaggaccag
ctgtctacgtcttcgttgcccagcatcaacaccttggtgggaaatggctacatgggggag
tttgatgcttattcctgcaagattaccacctctcctcctgcctctacagtttcattcagc
cacgatgcggtagctgaaagctcctgccctcagatgcagagccaagccttcaagctggat
gatctccaggtgtatggctgttacccaggatcctttgcgctcagctgccttgatgaaaca
ctgtcgtcatgtggctctgactactatggcagcccagtttatgccgctacttctcctgca
acgccgggctttcagtcccagtctgcacctgtctgggattcccctttcagtccctacccc
tcagccccccagtcctctgtggctgataaggccgccatggcccagcagctctcctttttc
accttcagcccggcaccagggcagctgtctccccttgggcagcatcaggacgctctgcca
ggccacgaagaccctttcttcctgtctcctcagcagcatgtctctcctattcattgtccc
cccatgtccctggaacacgtaccactggaaagccccaggatgctggagggagccatgacg
tctcctaaaacccacaacccaggatccagtgagggccgctgtgcagtttgtggtgacaat
gcatcctgtcagcactatggagtccgcacctgtgagggctgcaaaggtttcttcaagaga
actgtacagaaaaatgcaaagtatgtgtgcctcgccaataaagactgtccagtggacaag
aggaggaggaaccgctgccagttctgccgtttccagaaatgtcttgcagtgggaatggtc
aaagaagttgttcgaacagacagcctcaaaggtcgccgaggtcgcctgccatccaaaccc
aagactgtggctgaggcttcatccacgacccccagtgtcaacataatagcctctcttgtc
agagctcatttggactcaaacccaacccttgaaaagcttgactactccaagtaccaggaa
acagtggacaacctgaaagaaaaggaggatgccggcgatatccagcagttttatgacctg
ctgaccagtactttggatgtgataagaaactgggctgaaaccatcccagggttcacagat
ttctgcacagaggaccaggagctgctcctcgaatcttcctttgttgagctcttcattctg
cgacttgcatacagatcaaatcctgagaagaacaagttgatcttctgtaacggtgtggtc
ctccaccgactgcagtgcgttcgcagttttggtgactggattgactccatcatggatttc
tcccagaaccttcaccgcatgaacttagatatttccttgttcgcttgcctctcagcgcta
gttatcatcactgatcgccatggcctcaaagagcccaaacgggtagaggactttcagaat
catctcatcacttctttaagggaacacatgagcggaaatggatcagaatcaagccagacc
cagcccaactatctttcccgtcttctgggcaaactccctgaactgaggactctctgcaca
caaggcctacagcgcatcttctacctgaaactggaggatttggtgccccctccacctata
gtggagaaaatctttttggatactctgccgttctga
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