Micropterus salmoides (largemouth bass): 119887244
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Entry
119887244 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-3-like
KO
K06240
laminin, alpha 3/5
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04382
Cornified envelope formation
msam04510
Focal adhesion
msam04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119887244
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119887244
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119887244
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_I
EGF_laminin
Laminin_B
Laminin_II
EGF_LMN_ATRN
Laminin_G_3
PUMA_CC
AAA_13
CCDC39
BORCS6
ATG17_like
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
119887244
NCBI-ProteinID:
XP_038554052
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
CKPRIGGRQCDRCAAGYYRFPDCIPCDCNQGGVTPGVCHPDTGRCLCKRNVAGIKCDTCR
EGSFYFDPSSPHGCTSCFCFGATDQCQSSSKRRGKFVEMRVWRLESPDQEHVPSVLNTAS
NTVVADIQELPPTVQTLHWVAPWSYLGDRVSSYGGFLTYQSKSFGIPSEGMTLMDRTPDV
VLNGRNMTLIHMASQVPFPDRLYQGRVQLLEGNWRHAVTNRPVSREELMMVLASLVGLRI
RALYFTQTQRLSLGEVGLEGTTSTGTGGPGNTVEDCSCPPQYTGESCEKCAPGYYRDGSG
PYLGRCVPCECNGLSDECEERTGRCLNCQYNTAGDRCERCKEGYYGNAAQRTCKVCPCPF
SVLTNSFAIGCREVFGDFQCICRAGYTGDRCERCAPGYYGHPLISGGSCRPCNCNGNGNN
CDPTTGVCKNTLEPGDTNTDEHCQECDSCAQTLLNDLEKLDNELARIKAQLDNASASASS
RDRLKKLEKAVSDTKILVNKFNSAINTQRSRVTQLEEDTITLSDDISSLKDKADKRAADA
YKAVADVGKTHKRAKDLHSEIQNLLKKIQALLEQLKESGTRGDTVPNKNLAKMLEDAQRM
VKEMENRNFTPQKTAAEKERDNAEKLLDYIKANVSMQCDQNEAAAEKIRGLLKDYEAKLK
ELDEALKEAVDFVKKANAQNGLNAQALADLQKRIEDLKNERETVEDQMAMAEDELQKTED
LVKMLSDSKTDYEQLAAQLDGAKTDLTTKVNEITKAAAKKDIVEAAEEHAKNLDKLAREL
EDAVKNASGLSEVRGAKDAIDAYKNITDAINAAEAAANEAKDAADNALNNVKKQKLTQRA
KDLKETGDDLMQNAMQAQKDLQGATDSITDVKKRLENAEKKKKALQKDLLDAKNKLNGIK
RDDISNMIDEAKRKAAAANGSASDTMDKLNAMRKEIDQISVTPGNSNLSGVLDDLDQSVK
NLLKTIPSLNDKISEVENLTSELSPISNISENIKKIKELIEQARDAANRIVIPMKFTGNG
HVALRPPKNLEDLKAYTSLSLSLQRPAGRGDGRRRRRQTIDDGDMFVLYLGSRDSSKNYI
GMFLRENVLYGVYKLNGVEYQMKTGYITTSASEPAKFDRVDLRRIYQDATMILTKDITST
TPEDPIESSKQGEESKNLLELNPSDVVFYVGGYPANFTPPASLKYPMYKGCIEFSSFNDK
VVSLYNFQKAEKINLETPCKRYVPPMDSDYYEGTGYGKVVIDKPSSNLIVTITVFTRSEN
GLLFYIGSENDYFTVTMEKGVIFLRSNLLEAPATNNGKIFPKDDWAEILIISTSKGDIKV
RMSQVDVASAKATYSNSDFKEFYIGGAPQDLRERDNITIQPFKGCLKNVKLNQAFKPVTE
QVGISKGCPKESLVTRKAEFSLGSSLSADLKGFSLAADVTVSVGFKSTENEGLILQDKQL
ANGIDVQLENGYVILNFNNKIWKSNKQYHDGQWHYLTVTKRAGSVKLLIDDEDVGQEQSG
SSSTPDTGGSLYLGREKFKGCVSNLYTRRPDNLYKAEDFSNFQASGDVLLDMCTANSPPE
LMLDRFSRKNGVMQAINESLSACTLPALVQHAYRVGSPTSSLSYSLPLQVLQPRPHFSLD
VRTRAPEGLLFFAATRGGRSHLALYISKGRIRLSVGKQKEIFNREKYNDGKWHSVIFSLE
KKKFRLVVDGIRAQDGQLTNAELTSMQQFVSPVYLGSAPESLHKELKTKALPKQSVSGCI
RNFKMNGASMSNPTMNHGAGPCFEGQTQRGAYFSGNGAHVLINNSFVVGSSFELLFNIRP
RSLTGLLLHVSDSSRSQYRPATGHHLSVYLLRGEVVAHVKNGKGEFMVSVKPKASLCDGM
FHKISVIKRKNVVQLHVDTIXHYKIGPSSATTTLTKDSLYVGGIPV
NT seq
5720 nt
NT seq
+upstream
nt +downstream
nt
ttgtaagcctaggattgggggccggcagtgtgaccgctgtgctgcaggttattatcgctt
ccctgactgtataccttgtgactgtaaccaaggtggtgtcacacctggcgtgtgccaccc
agacacagggaggtgtctctgcaagagaaatgttgctggcatcaagtgtgatacctgtcg
ggaaggttccttctattttgacccatccagccctcacggctgtaccagctgcttctgctt
cggagcgactgaccagtgtcagagctccagcaaacgcagggggaagtttgttgagatgcg
ggtctggcgtttggaaagccccgaccaggagcatgttccctctgtgctgaacactgccag
taacacggtggtggcagacatccaggagcttcctcctacagttcaaactctacactgggt
ggcaccatggtcgtacctgggagacagggtttcatcttatggtggtttcctcacctacca
gtccaaatcctttggtattcccagtgaggggatgactctcatggacagaacacctgatgt
tgtgctgaatggtcggaatatgaccctgatccacatggcttcacaagtcccatttccaga
caggctgtatcagggcagagtccagctcttggagggaaactggcgccatgctgtcacaaa
caggcctgtctccagagaggaactaatgatggtcctagccagtttggttggcttgaggat
ccgagccttgtattttactcagacccagcgactcagcttaggggaggtgggcctggaggg
gacgactagcacagggactggtggtcctggaaacactgtggaagattgttcctgcccccc
tcagtacaccggagaatcctgtgagaaatgtgctcctggttactacagagatggcagtgg
gccttacctgggccgctgtgtgccctgtgagtgcaacggtctgtctgatgagtgtgaaga
aaggacagggaggtgcctgaactgtcagtacaacacagctggggacagatgtgaacgctg
caaagaaggttactatgggaacgcggctcagaggacatgcaaagtttgcccgtgcccatt
cagcgtgctcacaaacagttttgcaataggttgccgagaggtgtttggagacttccagtg
tatatgcagagcaggctacactggagacaggtgtgagaggtgtgctcctggttactatgg
tcatccactaatatcaggaggaagttgtcggccctgtaattgcaatggcaatggtaacaa
ctgtgatcccacgactggagtttgcaagaacacactggagccgggcgacacaaacacaga
tgagcactgccaagagtgcgacagttgtgcccagactttgctaaacgatctggagaagct
ggataatgagctggcaaggatcaaagctcagctagacaacgccagtgccagtgcatcctc
ccgggacaggctgaagaagctggagaaggccgtgtcagacaccaagattcttgtcaacaa
attcaactccgccatcaacacccaaaggtccagagtcacccagctggaagaggacacaat
cactctctcagatgacatcagctccctcaaagacaaggcagataagagggctgctgatgc
ttacaaagcagtggcagatgttgggaaaacccacaagagggctaaagatctgcactcaga
gattcaaaaccttctcaagaaaatccaagctctgctggaacaactgaaggagtcaggcac
cagaggtgatacggtgcccaataaaaacctggctaaaatgctagaagatgctcagcgcat
ggtgaaggagatggagaataggaacttcacccctcagaagacagctgctgagaaagaaag
agacaatgcagagaaactgctagactacatcaaggctaatgtaagtatgcagtgtgacca
gaatgaggctgcagcagagaagattcggggccttctgaaggattacgaggccaagctgaa
ggaactggacgaggctttgaaggaggcggtggactttgtgaaaaaagccaacgcccagaa
cggactgaatgcacaggcactggcagatctgcagaaacgtattgaagacttaaaaaatga
gcgggaaactgttgaggaccaaatggccatggcagaagatgagctgcagaaaacagagga
tttagtgaaaatgctatccgacagtaaaacggattatgaacagctggcagcacaactgga
tggtgccaagactgacttgaccacgaaggtgaatgagattaccaaggcagcagccaagaa
ggacattgtggaggctgcagaggaacatgctaagaaccttgacaagctggcaagggaact
tgaggatgctgtaaagaatgcaagtggactgtctgaggtgcgtggtgccaaagacgctat
tgatgcctacaagaacatcacagatgcaattaatgctgccgaggctgcagctaatgaggc
caaagatgcagcggacaacgccttgaacaatgtaaaaaaacagaagctgacacaaagagc
aaaagacctgaaagagactggagatgacctaatgcagaatgcaatgcaggcacagaaaga
cctccaaggcgccacagacagcattactgatgtgaagaagcgcttggagaacgctgaaaa
gaagaagaaagctcttcagaaagacttgcttgatgctaagaacaaattaaatggcatcaa
gagagatgatataagtaatatgattgatgaggccaagaggaaggcagctgcagccaatgg
ctcagcaagcgacactatggacaaactgaatgccatgagaaaggaaattgaccagatcag
tgtcactcctgggaactccaacctgagcggcgtgttggatgatttggaccagtcagtgaa
gaacttgttgaaaaccatcccatctctgaatgataagatctcagaggtagagaacctgac
ctcggagttgtcccccattagcaacatatctgagaacattaagaagatcaaagagctcat
tgaacaagcccgggacgcagctaacaggattgtgatcccgatgaagttcacaggtaatgg
ccatgtggcgctgcgtccaccaaagaatctggaggatctgaaggcctacacatccctgtc
tctttcgctgcagagacctgcaggtaggggagatggaagacgcagacgcagacagaccat
agatgatggagacatgtttgtgttgtaccttggcagcagagattcttctaagaactacat
aggtatgtttctgagggagaatgtgctgtacggcgtgtacaagctcaatggagtcgaata
ccagatgaaaacgggttacatcaccacgtctgcgtctgagccggccaagttcgatagagt
ggacctgcgcagaatttaccaagatgcaacgatgattctcaccaaagatatcacctcaac
cacacccgaggacccaattgagagcagcaagcaaggagaggagagcaagaacctattgga
actcaatcccagtgatgtagtcttctatgttggaggttaccctgccaacttcactccacc
agcttctctcaaataccccatgtacaagggctgcattgagttctcctcttttaacgacaa
agtcgtcagtctatataatttccaaaaggcagagaagatcaatttggagacaccatgcaa
gagatatgtacctccaatggattctgactactatgaaggcactggatatggcaaagtggt
tatagataaaccatcttcaaacctcatcgtcactattaccgtctttactcgttcagaaaa
cggtttgctcttttacatcggaagcgagaacgattactttactgtgacgatggagaaggg
tgtaatttttctacgtagtaatttgctcgaagcaccagctacaaataacggcaaaatatt
cccgaaggacgactgggcggaaatccttatcattagtacgagcaagggagatataaaagt
ccggatgtcccaagtagacgtggcctcagcaaaagctacatacagcaacagtgactttaa
agaattctatattggtggtgccccacaagacttgagggaaagagataacatcactataca
accattcaaaggatgtttgaagaatgtgaagctgaatcaagcctttaaacctgttactga
gcaagtgggcatcagcaaaggttgtccaaaggaatccttggttactcgtaaagcagagtt
cagcttggggagctccctgtccgctgacctcaaaggctttagtctggctgctgacgttac
tgtctccgtcggattcaagagcacagagaatgagggtctcattctgcaggacaaacagct
ggctaatgggattgatgttcaattagaaaatggctatgtgattctcaatttcaacaacaa
gatctggaaatcaaacaaacaatatcatgatggccagtggcattatttgactgtaaccaa
aagagctggaagtgttaagctgcttattgatgacgaagacgtgggtcaggagcagagtgg
cagctcttccacacctgacacgggtggctccctttacctgggaagagagaagttcaaagg
ctgtgtttccaacctctacacaagacggccagacaatctgtataaagctgaggacttcag
caacttccaggcttctggagatgtcttgctggatatgtgtactgctaacagtcctcctga
actgatgttggaccgcttctctaggaagaatggtgtgatgcaggctataaatgagagtct
atcagcatgtacattaccagccctggttcaacatgcttatcgcgtgggcagccctactag
cagtctgagctacagccttccactacaggtcttacagcccaggccccacttttctctaga
tgtcaggactcgagctcctgagggcctgttgttctttgctgctacaagaggagggcgctc
tcatctagctttatacatatccaaaggcaggatcagactgtctgtaggcaaacagaagga
gatcttcaacagggaaaagtacaatgatggaaaatggcactcggtcatattcagtttgga
gaagaagaaatttcgactggtcgttgatggtatcagagcccaggatggtcagctgacaaa
tgctgagttgacatctatgcagcagtttgtgtcacctgtgtacctgggcagtgccccaga
gtcactccacaaagagctgaagacaaaggcccttccaaaacaaagtgtgtctgggtgtat
ccgcaattttaaaatgaacggagcgtcaatgtcaaatccaacaatgaaccatggcgctgg
cccctgcttcgagggacagacacaaagaggggcttatttctcagggaatggagcacatgt
ccttatcaacaactcctttgttgtgggctccagctttgagctgctgtttaatattcgtcc
acggagtctgaccggactcctgctacatgtcagtgattccagtaggagccaatataggcc
tgcgaccggccaccatctcagtgtctacttgctcagaggagaggtagtggcgcacgtgaa
aaatggaaaaggggaattcatggtgtcggtgaagccaaaagcttctttatgtgatggaat
gtttcataaaatttcagtaatcaagaggaaaaatgttgtgcaactgcacgtggacacaat
annacattacaagattggaccatcgtctgccactacaactttgaccaaagactccttgta
cgtgggtggcattcctgtga
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