Micropterus salmoides (largemouth bass): 119892815
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Entry
119892815 CDS
T07309
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03410
Base excision repair
msam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119892815
03450 Non-homologous end-joining
119892815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msam03400
]
119892815
Enzymes [BR:
msam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119892815
DNA repair and recombination proteins [BR:
msam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119892815
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
119892815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
DNA_pol_B_thumb
BRCT
BRCT_2
Ribosomal_S21
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
119892815
NCBI-ProteinID:
XP_038560756
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MECRHGIMKAFPKVKRAKALHGKDAPPVKKKPDECDVTGNTFNGVTVYILPAGIGNARYQ
IFQRQIQQNGGQTESSLCPSVTHVVVDDNMNIDRALRLLKVDYMPSGVHLLKCTWLSLCI
SEKQMLDVDSYSLLLPKRESETRHENIKEELPNVKPSVQPVSDQNNQEETIDMTVPDTKE
EVQGEEDGVSQSDLEALITGQHPKEETPGPSLDPGPDSAAQKLVSGKWVCAQSSQSKNHN
FNKHITDKLEVLAKAYTHQGDKWRALGYSKAINALKSYHKPITSYQEACQIPGIGKRMAD
KIDEIMESGHLRKLDHIGEAVPVLELFSNIWGAGVKTAQLWYQQGFRTLEDIRAKAHLSN
TQKIGLKHYNDFLDRMPREEAAAIEKVVRDATQAIDPQLVAMACGSYRRRKATCGDVDVL
ITHPDGKSHKGVFSKVLQSLHDSGFLTDDLVSHEENGEQXEYMGVCRLPGPGHRHRRLDI
IVVPYNEFACALMYFTGSAHFNRSMRALAKTKNMSLSEHSLNKDVVRHGNLKMYGGTPLS
TLTEEDXFSLLGIPYRQAHERDW
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcgtcacgggattatgaaagcattcccgaaagttaaaagagccaaagcgtta
cacggaaaggatgctcccccagtaaagaagaaacctgatgaatgtgatgtgacaggaaac
acttttaatggtgtcactgtgtacatcctgcctgctggaataggaaatgccagataccag
atcttccaaagacaaattcagcagaatggaggacagacggagagttcactgtgtcccagt
gtcactcatgttgttgtggatgacaacatgaatatcgacagggctctgcgcttactgaaa
gtagattacatgccctcaggagtccacctgctgaaatgtacttggttgagcctgtgcatc
agtgagaaacaaatgctggatgttgacagctacagccttcttctacccaagagggaatct
gaaacacgtcatgaaaatattaaagaagagttgccaaatgtcaagccatctgtgcagcca
gtgtcggatcaaaacaatcaagaggagaccatagacatgacagtcccagacaccaaagag
gaagtgcaaggagaggaagacggggtctctcagagtgatctggaagcactcatcactggc
cagcaccccaaagaggagactcccggccccagtcttgatcctggtccagactcagcagct
cagaagctggtctcagggaagtgggtctgtgcccagtcctctcaatccaaaaatcacaac
ttcaacaagcacatcacagacaaactagaagtcctggcaaaggcgtacacacaccagggg
gacaagtggagggcactgggctactctaaagctataaacgcactgaagagttaccataag
cctattacatcatatcaggaggcttgtcagatcccaggaattggaaaacgcatggccgac
aaaattgatgagatcatggaaagcggccacctgcgaaagctagatcacattggagaggct
gtgcctgtgttggagctctttagtaacatctggggtgcaggagttaaaactgcacagttg
tggtaccaacagggatttcgcacattggaggatatccgcgcaaaagctcacctgagcaac
actcagaaaataggactcaagcactacaatgactttctagaccgaatgcctagagaagaa
gcagcagccatagagaaagtggtgagggatgctacccaggccatagacccacagctggtg
gcgatggcatgtggctcctaccgacggagaaaggccacatgtggagatgttgacgtactt
ataactcatcctgatggcaagtcccacaagggcgttttcagcaaagtactgcagagcctc
catgacagtgggtttttgacggatgatctggtgagccacgaggagaatggagagcagnaa
gaatacatgggtgtgtgccgtttgccaggacccggccaccgccatcgcaggctggacatc
attgtagtgccctacaatgagtttgcctgtgctctcatgtatttcaccgggtcggcacac
ttcaaccgctcaatgagagccctggcaaagacaaaaaacatgagtttatcagagcactca
ttgaacaaagatgtggtgcgccatggtaacttgaagatgtatggcggcactccactttct
acactgacagaggaggatngttttagtcttttaggcataccgtacaggcaggctcatgaa
agggactggtga
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integrated database retrieval system
