Micropterus salmoides (largemouth bass): 119894189
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Entry
119894189 CDS
T07309
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msam04131
]
119894189 (lingo1a)
Membrane trafficking [BR:
msam04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
119894189 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_9
Ig_2
LRR_Zer-1
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
119894189
NCBI-ProteinID:
XP_038562707
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MAAGEATGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNVQERSVMCHRKKLMTVPE
GIPAETRLLDLSKNRIRTINPDEFAIFPNLEHLELSENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLSLEKCNLSSVPTEAFTHLHSLITLRLRHLNINVIRDYSFKRLYRLKVLEIA
NWPYLDTMTPNCLYGLNLTSLTIANANLTTIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQQKFVDEGAIVHFACQADGDPAPVIMWLSPQKKFITTKTIGRLSVLPDGNLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHIHSYSPDWPHQPNKTFAFISNQPTETGANGTRAN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SSTVDAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggggaagcgactgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtgctttctggctccaccacaggctgtccatcccgctgtgag
tgcaatgttcaagagcgctctgtgatgtgccaccgcaaaaagctcatgacagttcctgag
ggcattcctgcagaaacaagactgctggacctcagcaagaaccgtattagaaccatcaac
ccagatgagtttgccatctttccaaacctcgaacacctggagctcagtgaaaacacgatc
tccactattgaacctggagcattcaacaacctttatggcttgcgaacattggggctgcgt
agcaacaagcttaagctgatccagcttggtgtcttcacaggcctgagtaatctcacacaa
ctggacataagtgagaacaagattgtcatcctgttggactacatgttccaagatttgtac
aacctccggtctttagaagtgggcgataacgacctggttttcatctcccaccgagctttt
catggcctaagtagccttgagcacctgagtcttgaaaagtgtaacttgtcctctgtgcca
acagaggctttcacccatctccacagtttgatcactctcaggctgcgtcacctcaatatc
aacgtcatacgggattactctttcaaacggctctatcggctgaaagtgttggaaatagcc
aattggccatatttggatacgatgaccccaaattgcttgtatggattaaatctcacctcc
ttgaccattgcaaatgccaacctgacgacgattccttatgtagccctgcggcacttagtt
tatttgcgctttcttaatctttcatataaccctatccataccattgaggggaataagctc
cacgatcttctgcgtcttcaggaatttcatctggttggaggtagactggcaatgattgag
ccctactctttccgtggtctaaactacctgaagattctaaatgtgtctggaaactctctt
agcactttggaggagtctgctttccattcagttggcaacctggaaacccttgccttgtat
gataatccccttgcctgtgactgccgactgttatgggttttccgacgacgctggagactg
aacttcaacaggcagcagcctacctgtgcgtcccctgagtttgtccaaggcaaagaattt
aaagactttccggatgttctgcagcctaactacttcacatgtcgcaagtctaggattagg
gatcgcaaaccccagcagaaatttgttgatgagggagccatcgttcattttgcctgccag
gcagatggagatcctgcaccagtgataatgtggctatccccacagaaaaagtttatcacc
accaagacaattggaaggctctcggtgttgccagacggtaaccttgaggtgcgttatgcc
cagattcaagacaatggtacatatgtgtgtatagctagcaatgcaggtggaaatgacacc
tctcttgctcacctgcacattcatagctactcgcctgactggccacaccagcccaacaag
acatttgcgttcatctccaatcagcccacagaaactggtgctaacggtacaagagccaat
gtcccattcccctttgatataaagacgttgatcattgcgaccacaatgggcttcatctct
tttcttggcgtcgtcttgttttgtctggtactgctcttcctttggagcagaggtaaaggc
aacactaagcacaacattgagattgagtatgtgccacggaaatcggacgctggcatgagc
agcagcacagtggatgctcctcgcaagtttaacatgaaaatgatttaa
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