Micropterus salmoides (largemouth bass): 119895624
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Entry
119895624 CDS
T07309
Symbol
siah2l
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msam04121
]
119895624 (siah2l)
Enzymes [BR:
msam01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119895624 (siah2l)
Ubiquitin system [BR:
msam04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
119895624 (siah2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
119895624
NCBI-ProteinID:
XP_038564795
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MSRPSSAGAGAGAGGGGLGSGAGGGGLGAGAGGGGLGSGKAGGGKGSGGAAAAAATTAAA
AAAAAAAAAAAAAGVCSVAASGSAAPSSAASLISVGLPGQSPELTALFECPVCFDYVLPP
ILQCQAGHLVCNPCRQKLSCCPTCRGPLTPSIRNLAMEKVASTLPFPCKQCVCVCSMLCP
ASCLPLLRELAQWRCLLGWHRHHHGVGSASATGLTANAGQQQQQQQQQGLEVRGRAGRPV
GRTKPLPGSQYSSAGCLLTLHHSEKPDHEEVCEFRPYTCPCPGATCKWHGSLEAVMPHLM
HAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFSHHFMLVLEKQEKYEGHQQFFAVV
LLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIMNSDCLVFDTSIAHLFAD
NGNLGINVTISMC
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctcagccggagccggagccggagccgggggtggaggactcgggtcc
ggggccgggggtggaggactcggggccggagccgggggtggaggactcgggtccgggaaa
gcaggcggaggaaagggttcggggggcgccgctgccgccgccgccaccaccgcagcagca
gcagcagcggccgccgcagcagcggcagcagcggccgccggtgtgtgctctgtggccgcg
tccggctccgctgccccttcctccgctgcgtccctcatctcggtcggcttgcccggacag
tccccggagctcacggcgctgttcgagtgtccggtatgcttcgactacgtcctgccgccc
atcctgcagtgccaggcgggtcacctggtctgcaacccgtgccgccagaagctgagctgc
tgtccgacctgccgaggcccgctcaccccgagcatccggaacctggccatggagaaggtg
gcctccacgctgccgttcccctgcaagcagtgtgtgtgtgtgtgttcgatgctgtgtccg
gcctcctgcctgcccctcctcagggagctggctcagtggcgctgcctgctgggctggcac
cgccaccaccacggagtcggttcagctagcgccacagggctaaccgctaacgcaggacag
cagcagcagcagcagcagcagcaggggttggaggtcaggggccgagccggtcgccctgtc
ggccgcaccaaaccgctgccgggcagccagtactcgtcggccggctgcctgctgactctt
caccacagcgagaagcccgatcacgaggaggtgtgcgagttcaggccatacacctgtccg
tgtcccggagctacctgcaagtggcacggctcgctggaggccgtcatgccgcacctgatg
cacgcgcacaagtccatcaccacgctgcagggagaggacatcgtcttcctggcgacggac
atcaacttgccgggcgccgttgactgggtgatgatgcagtcgtgtttcagccaccacttc
atgctggtcctggagaagcaggagaagtacgaaggccaccagcagttcttcgccgtcgtg
ctgctcatcggcacccgcaagcaggccgagaacttcgcctaccgcctggagctcaacggc
aaccggcgccggctcacctgggaggccacgccgcgctccatccacgacggggtggcggcc
gccatcatgaacagcgattgcctggtgtttgacacctccatcgcgcatctgttcgccgac
aacggcaacctggggatcaacgtcaccatctccatgtgctga
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