Micropterus salmoides (largemouth bass): 119895787
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Entry
119895787 CDS
T07309
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
119895787 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119895787 (irf1b)
Transcription factors [BR:
msam03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
119895787 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
SMP_MUG190-like
Motif
Other DBs
NCBI-GeneID:
119895787
NCBI-ProteinID:
XP_038565028
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MPVSRMRMRPWLEKMIESNSIAGLNWVDKDKTMFSIPWKHAARHGWELDKDACLFKKWAI
HTGKYVEGQTCDPKTWKANFRCAMNSLPDIEEVKDKSVNKGHQAMRVFRMLPTTPKSRDK
RSKAKETKPRKKSSVIKMEEDTDYSDTQSPMNESMPEDTLSTQENTVDSTVHTEQQDFPF
VAQSEVPDWSSTVVIGLENFNSFSHKFEVSPEHDFDVDYSDDIIQICQQLEKDSHWLSSS
LDGRGFLSNEACTSPGSQWSESSSVDELDEMPQYTTLGSDLTSPTDNVWNNLCQQISPML
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtgtcaaggatgaggatgaggccatggctggagaagatgatcgagtcaaactcc
attgcgggtctgaattgggtggacaaggataagacgatgttctcaattccctggaagcat
gcagctcgacatggctgggaactggacaaggacgcatgtctgttcaaaaagtgggccatc
cacacagggaaatacgtggaaggacaaacctgtgacccaaagacatggaaagccaacttc
cggtgtgcaatgaactcactgcctgacatcgaggaggtgaaagacaagagcgtcaacaaa
ggccaccaagctatgcgtgtattcaggatgttgcctaccaccccaaaatctagagataaa
cgaagcaaagcgaaggagacaaagccaaggaagaagagctcagtgatcaaaatggaagaa
gacacggactacagtgatactcagtctcccatgaatgagtcaatgccggaagacactttg
tctactcaggagaacacagttgacagcacagtgcacacagagcagcaagattttcccttt
gtggctcaatctgaagttcctgactggtcttcgacagttgtgatcgggcttgagaacttc
aacagcttcagccacaaatttgaagtttcacctgaacacgattttgatgtcgactatagc
gacgacattatccagatttgccagcaactggagaaagactcacactggttgtcaagcagt
ttagacggcagggggttcctgagcaatgaagcatgcaccagtccagggagccagtggagt
gaatcttcctcagtcgacgaactagacgaaatgccacagtacacaactttgggctcagac
ctcacaagtcccacagacaacgtctggaacaacctttgtcaacagatctcacccatgctc
tga
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integrated database retrieval system
