Micropterus salmoides (largemouth bass): 119899060
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Entry
119899060 CDS
T07309
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
msam00536
]
119899060 (slit2)
Glycosaminoglycan binding proteins [BR:
msam00536
]
Heparan sulfate / Heparin
Axon guidance molecules
119899060 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
hEGF
LRR_1
DL-JAG_EGF-like
Laminin_G_3
EGF_2
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
119899060
NCBI-ProteinID:
XP_038569391
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MVGALSPVGPGRFPATALGPLVAVLVLVLSRGADGQPCPAQCSCTGTTVDCHGQGLRGVP
RNIPRNAERLDLNANNLTKITKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRL
NRNNLAVFPELLFLGTTKLYRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIEDGA
FRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCNVAWLSEWLRQRPRL
GLYTQCMAPPHLRGHNVAEVQKKEFVCTGHQSSSSSSCSVLQCPESCTCSNNIVDCRGKG
LTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSL
NSLVLYGNKITEISKGLLEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQT
IAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQ
IKSKKFRCSGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIPQYTAEL
RLNNNEFTVLEATGIFKKLPQLRKINLSNNRISDIEEGTFEGASGVNELILTSNRLENIH
HRMLKGLGGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDTLHSLST
LNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQDFACEDGNDE
NSCSPALRCPAECSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGNHFTQVPVELSNYKH
LTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSLHGNDIS
LIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGPGDMTDKLLL
TTPSKKFTCTGPVDMNIQAKCEPCLSNPCKNDGTCSNDPVHYYRCTCPYGFKGQNCEEPI
HACISNPCDNGGTCHLKEGEGSNFWCVCPEGFEGDTCEINIDDCEDNDCENNSTCVDGIN
NYTCMCSPEYTGELCEEKLDFCAPELNPCQHDSKCILTPQGYKCECTPGYVGEHCELDYD
DCEDSKCQNGGQCIDAINGYTCVCPAGYSGLFCEFSPPMVLPRTSPCDNHECLNGAQCVV
MGSDPRCQCLHGYKGERCEMLVSVNFVNRESYLQLPSSLLSPETNISLQIATDEDSGVLL
YKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVASDQTLSLSIDG
GPPKSINSISKQSTLNIDSPLYLGGMPERASASGGLSSLQHSSGGRNGTSFHGCLRNLYI
NGKLQDLGAGLGPRASGSGTAQSTTRQWLGHGVEPGCQPCQRGACVQGDCHPTGHRGFTC
TCHPGWTGTVCDQQVNNPCDGNKCIHGTCLPINSYSYSCRCQPGFAGVLCDEQDQDAANP
CSLSRCKHGKCRVSGLGKTYCECNSGYTGEACDREVACRGERVRDVYQRQQGYAACQTQE
KVSRLECRGSCPGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGCTKCSS
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgagccccgttggccctggccgcttcccggcgactgcgctgggaccg
ttggtggctgttctggtactggtcctgtcaagaggagcggacggccagccctgcccggcc
cagtgctcctgcaccgggactacagtggactgtcacggccaagggctccgcggcgtgccc
aggaacataccacgcaacgcagaaagactggatctgaatgcaaacaacctcactaaaatc
accaaggcggattttgcaggactgaggcatctgcgagtgttgcagctgatggagaacaaa
atcaccacgatcgagagaggagccttccaggacctgaaggagctggagagactgcgcctg
aatcggaataatctggccgtcttccccgagctgcttttcctgggaacaacaaagctttac
agacttgatctcagcgagaaccagattcagggggttccgaggaaagccttcaggggagct
gtggagatcaagaacctccagttggactacaaccacatcagctgtattgaagatggagct
ttccgagcgttacgtgacctggaagtgctcaccctcaacaacaacaacatcagccgactg
tctgtggccagtttcaaccacatgccgaagctcaggacctttcgcctgcactccaacaac
ctgcagtgtgactgcaacgtggcctggctgtcagagtggctgcgacagcgcccccgcctg
ggtctttacacacaatgcatggccccgccgcacttgagggggcacaacgtggctgaggtg
cagaagaaagagtttgtctgcacaggtcaccagtcatcatcatcttcctcctgcagtgtg
ttacagtgcccagagtcctgcacctgcagtaacaacattgtggactgcagagggaaggga
ctgactgaaatacccaccaatctgcctgaaaccattactgagatacgactggagcagaac
gccatcaaggtgatcccagctggggccttttctccttataagaagctgcgcaggatagac
ttgagtaacaaccagatatctgagttagcctcagacgccttccaaggtctgcgctccctc
aactctctggtactatatgggaacaagatcacagagatttccaaaggactgttggaggga
cttttttctctacagctattgttactcaatgctaataagatagcgtgtctgcgtgtggac
gcgtttcaggacctccacaacctcaatctgctctcactatatgacaacaagctccagacc
atcgccaaggggaccttctcgtcgctaagagccatacaaacacttcatttagcccaaaat
ccgtttatctgtgactgccatctgaagtggcttgcagactatcttcaggacaatcccatc
gagacgagcggtgcgcgctgcaccagcccgcgacggctcgccaacaaacgaatcggacaa
atcaagagcaagaagttccgctgctcaggtacagaggattaccgcagtaagctaggaggg
gactgcttcgccgacttggcctgtcccgagaagtgccgctgtgagggcaccacagtcgac
tgctccaaccagaaactcaccaaaataccagaccacatcccccagtacaccgccgaactg
cgtctgaacaacaatgaattcactgtgctcgaggcgacggggatcttcaaaaagttgcct
cagctgaggaagattaacctgagtaataaccgcatcagtgacatagaggaggggacattt
gaaggagcctcaggggtcaatgagctgattctgacctccaacagactggaaaacatacac
caccgcatgctgaagggactcggaggcctccgcacacttatgctgaggagtaaccgtatc
agctgtgtgagtaacagcagctttgtggggttgagctcagtgcgtcttctgtcgctctac
gacaaccagatcacctcaatgaaccccggcgccttcgacacactgcactccctgtccaca
ctcaacctcctggccaatcccttcaactgtaactgtcatctggcttggctcggcgactgg
ctgagaaggaaacgcatcgtcactggtaacccacgctgccagagtccttacttcttaaag
gagatccctatccaggatgtggcagtccaggactttgcctgtgaagatggtaatgatgag
aacagctgctctccagcgctgaggtgtccagcagagtgttcctgtctggacactgtggtg
cgctgcagcaacaagggcctcaccacgctgcccaaaggccttcccaaagagaccactgag
ctgtatctggatggtaaccacttcactcaggttcctgtggagctctccaattacaaacac
ttaacactcattgatttgagtaacaaccagatcagcacgttgtccaaccacagcctcagt
aacatgtccgagctgcttaccctaatcctgagctacaaccgcctgcggtgcataccagtg
agggcgttcgatggtctcaagtctctccgtttgctgtctctccacggtaacgacatatca
ctgataccagagggagccttcaaagacctgtcatcgctctcccacctggctctgggtgcc
aaccctctgtactgtgactgccacatgcagtggctgtcagactgggtgaagagcggctac
aaggagcctggcattgccaggtgtgctgggcccggtgacatgaccgacaaactgctgctc
accacgccttccaagaagttcacctgcacaggtccggtagatatgaatatccaggctaag
tgtgagccctgcctgtccaacccctgcaagaatgatggcacctgctccaatgaccctgta
cactactaccgttgcacctgcccctatggatttaagggacagaactgtgaggagcccatt
cacgcctgcatcagcaacccgtgcgacaatggtggcacttgtcacctgaaggaaggagaa
gggagcaatttttggtgcgtgtgtccagagggctttgaaggcgacacgtgtgagatcaac
atcgatgactgtgaagataatgactgtgagaacaactccacctgcgttgatggaatcaac
aactacacgtgcatgtgctcgccagaatacacaggggagctttgtgaggaaaaactggat
ttctgcgctccagagctgaacccatgtcagcacgactcaaagtgcattttgactcctcag
ggatacaagtgtgagtgcactccaggctacgtaggtgaacactgtgagctggactatgat
gactgtgaagacagcaagtgtcagaacggtggtcagtgcattgacgctatcaacggatac
acctgcgtctgtccagcgggatacagcgggttattctgcgagttctctccccccatggtc
cttcctcgcaccagtccctgtgacaaccacgagtgcctcaatggggcgcagtgtgttgtc
atgggatctgacccccgctgccagtgtctccacggctacaagggtgagcgctgtgagatg
ctcgtcagtgtcaactttgtcaaccgcgagtcctacctgcaacttccctccagtctcctc
tcaccggagaccaacatcagcctacagattgctacagatgaggacagtggtgtgttgttg
tacaaaggggacaatgatcacattgccatggagctgtacaggggacgcctcagggtcagc
tacgatactggatcttaccctccttctgctatatacagcgtggagacagtgaatgatggt
agcttccatgctgtggagttggtagcatcagaccagactttgtctttgtccatcgacggc
gggccacctaaatccatcaactccatcagcaaacagtccacactcaacatagattctccg
ctttacctgggaggtatgccagaacgtgcctcagcctccgggggcctctcatccctgcag
catagctcaggaggacgcaacggcaccagcttccatggctgcctccgcaacctgtacatc
aacggaaaactccaggacctaggggccgggctggggccaagagcttcaggctctggcact
gcacagagcaccactagacagtggctgggccacggagtggagccaggctgccagccctgc
cagagaggcgcctgcgtccagggtgactgtcacccaacagggcatcgtggctttacctgc
acctgccaccctggctggacgggaacagtgtgtgaccagcaagtcaacaacccctgtgat
ggcaacaagtgtattcatggtacctgccttccaatcaactcctactcctactcctgtcgt
tgccagcctggttttgctggtgtactctgtgatgagcaggaccaagatgcagctaacccc
tgcagtctgtctcgctgtaaacatggcaaatgtagagtgtcgggcctgggcaagacttac
tgcgagtgtaacagtggatatacaggagaggcgtgtgacagagaggtggcctgccgaggg
gaacgggtccgagatgtctaccagagacagcaaggctacgcggcgtgccaaacccaggag
aaggtctcccgtctagagtgtcggggtagctgcccggggggagcagaaggacagggcacc
tgctgcacccccctgcgcagcaaacgcaggaaatacaccttccagtgcactgacggctct
tcttttgtccaggaagtggagaaagtggtcaagtgtggctgtacaaagtgttcctcataa
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integrated database retrieval system
