Micropterus salmoides (largemouth bass): 119900649
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Entry
119900649 CDS
T07309
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119900649 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msam03000
]
119900649 (runx1)
Transcription factors [BR:
msam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
119900649 (runx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
119900649
NCBI-ProteinID:
XP_038571730
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MSPVSTTLWMSYFPVFHFNSLMFVHLYFMLDFWTARTPSSIKKKVERKKSQKNTCCMASN
SIFESLLSNQSAFTRDPAPGRRYTPPSTTLASGGKMAEALPLGAQEAGGGSALVGKLRMA
DRGMVEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVGLGDIPDGTLVTVMA
GNDENFSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYQRAIK
ITVDGPREPRRHRQKMDEVKPGSLAFSERLTELEHLRRSSMRVTPPHHHHHQPSANTRQS
VALNSATFANPTHTQITADSRQMQSSPSWSYDQSYPYLGHATPTVHTANALSPGRSSLSD
LSSRLTGPDLTAFTDHRMTLERPFTSLPSLPDSRFSDPRVHYPPTAAAFTYTPSHNPVSN
GTLGLTMATAMATTPTGRYHTYLPPPYPANTPHQAQNGPFQSTSSPYHLYYSTAAGSYQF
SMMAGGGGSSDSRSPPRILPPCTNASTGSSLLHPSLPNQNEGVGVEVESSHSSSPTNMAA
AEAVWRPY
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgtgtcgactactctgtggatgtcgtattttcctgtgtttcatttcaattca
ttgatgtttgtgcatttatacttcatgttggacttttggactgccaggacaccgtcttct
ataaaaaaaaaggtggagaggaagaaaagtcaaaagaatacttgttgtatggcatccaac
agtatctttgaatcattgttgtccaatcagtcagcttttacacgagacccagcccccggc
cggcgttacacccccccctccaccaccctcgcatcgggggggaagatggccgaggccctg
cctctgggcgcccaggaggccggaggcgggtccgctctggtgggcaaactgcgcatggcc
gaccgcggcatggtggaggtgatctcagatcatccaggtgagctggtgaagacagacagt
cccaacttcctgtgctctgtgctgcccacacactggaggtgtaacaagaccctgcccatt
gcttttaaggttgttggccttggcgacattcccgatggcaccctggtaacggtgatggcg
gggaacgatgagaacttctcagctgagcttcgaaacgccacggccgccatcaagaaccaa
gtggccagattcaacgacctgcgcttcgttggccgcagtggaagagggaagagcttcact
ctgaccatcactgtgttcaccaatcctcctcaggtggccacgtaccagagagctattaaa
atcacagtggacggtcctcgagagccacgacggcatcgtcagaagatggacgaggtcaaa
cctggctcgctggctttctctgagaggctgacagagctggaacatctgaggcggagctcg
atgagggtgacgcctcctcatcaccatcaccatcaaccctctgccaacacccgccaatct
gtggcactcaactctgccaccttcgccaaccccacccacactcagataactgccgattcc
agacagatgcagtcgtctccgtcttggtcctatgaccaatcatacccttaccttggccac
gccacgcctaccgtccacacggcgaatgccctttcgcctggccgatcttcactcagtgat
ctgtcctcacgactcacaggtcctgacctcacggccttcaccgaccacaggatgacctta
gaacgacctttcacctccctcccctccttgcctgactcacgcttctccgatccccgggtc
cactaccctcccacagcggccgccttcacctacaccccctctcacaaccccgtctccaac
ggcacccttggcctcacaatggcaacggccatggcaaccaccccgacggggaggtaccac
acttacctgcctcctccctacccggcgaacaccccccaccaggcacagaatgggcccttc
cagtccacctcctcgccatatcacttgtactactccactgctgccgggtcataccagttc
tccatgatggccgggggaggaggcagcagtgactcgcgctccccgccaaggatcctgccg
ccgtgcaccaacgcctccacaggctcctccctcctgcacccctctttgcccaatcagaac
gaaggagtgggtgtagaggtggagtccagccacagtagctccccgacaaacatggcagct
gctgaagcagtctggagaccttactga
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