Micropterus salmoides (largemouth bass): 119904065
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Entry
119904065 CDS
T07309
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha
KO
K04834
voltage-gated sodium channel type II alpha
Organism
msam
Micropterus salmoides (largemouth bass)
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119904065 (scn1laa)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119904065 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
ATP-synt_B
PFF1_TM
FraC
Motif
Other DBs
NCBI-GeneID:
119904065
NCBI-ProteinID:
XP_038576385
LinkDB
All DBs
Position
Unknown
AA seq
1998 aa
AA seq
DB search
MAQLLVPPGPDSFRPFSRESLKAIERRIAEENAKKPKGEKRKRTDDNGLKPSRDLEAGKS
LPFLYGDIPKGMVSTPLEDLDPYYCNQRTFIVLNKGNFIFRFNAAPALYLLSPFNLLRRI
SIRILVHKLFSIVIMCTIIANCGFMTLSNPPDWTKNVEYTFTAIYTFESLIKILARGFCI
GKFTFLRDPWNWLDFSVIVMAYVTEFVNLGNFSALRTFRVLRAFKAISVIPGLKTIVGAL
FQSVKKLANVMILTVFCLSVFALIGLQLFMGTLKQKCVRKMANSTLNGTSYIETYMNGTG
QKVFNKTAYLLDTRNYYYLPGKRDPLLCGNGSAAGHCPDGFECIKVGTNPDYGYTSFDSF
GWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYEE
QSQATIKEARQKEEEFQDMLEQLKRQQEDAQAAATAAASESEEVGGKVGGIESSSDTSKL
SSKSAKERRNRRKKRKEEEGKGADEKFPKSESQDSIKKARCRFSVDANLLSYDMKCSSAH
QSFLSFRGPLFSSRRNSRTSLFSFRSQAQDMGSENEFADDENSIFEDNLSRRGSLFIPRH
CDRRASSMSHCSFLSHLLLPTNGIKHSSVDCNGVVSLVGGQSLPSSPVGLLLPKVTVDMA
STQDIVDTTDTEYRQAGGGTQQESMDFLEGPEARQRAHSIASVITSTMEELEESRQKCPP
CWYKFANTFLIWECCPAWLKIKKVVKLIVMDPFVDLTITICIVLNTLFMAMEHYPMTGGF
NNTLSVGNKVFTGIFTAEMVLKIVALDPYYYFQMGWNIFDGIIVSLSLMELCLENVVGMS
VLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKYY
KDCVCKISEDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGTTMCIIVYMMVM
VIGNLVVLNLFLALLLSSFSADNLAATEDDSDMNNLQVALGRIHKGIAFAKSLLRSSCNS
VCLRRKKKGKDKDKSLDELHRSLGPNGVPNHTLKDFPGNGDVTGVDKNGDKYIVYSKSDD
SIMSFINNPSLTVSVPIAVGESDFENLNTEDFSSASSDAAGCHVLIDDDDQFSSSEGSTV
DGMAGGEGGQSVDFELEECMDPDACFPDGCVQKFQCCQVNTEVGWWKVWWTLRKTCYRIV
EHNWFESFIIFMILLSSGALAFEDIYIEKRKTIKTMLEFADKIFTYIFILEMLLKWVAYG
FAKYFTNAWCWLDFLIVDVSLVSMVANAIGYSDLGPIKSLRTLRALRPLRALSRFEGMRV
VVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYGRCVNKTTDKPFLPSEVKNMND
CLAKDLELVRWKNVKVNFDNVGFGYLALLQVATFKGWMDIMYAAVDSQNKQEEQPEYEVN
LKMYLYFVVFIIFGAFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGS
KKPQKPIPRPSNKIQGYFFDLTSKQAFDIVIMVLIWLNMVAMMVETDDQSEETAKILNRI
NEVFICVFTGECLLKIISLRQYYFTNGWNVFDFIVVILSILGLFLAEVIKRYFVSPTLFR
VIRLARIGRVLRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVK
HEAGIDDLFNFETFGNSMICLFQITTSAGWDGLLAPILNTDKEDCSNSTEHPGSPTTGNC
GNPPVGIAFFVSYIIVCFLIVVNMYIAVILENFSVATEESADPLSEDDFEMFYEVWERFD
PHATQFMEYYKLSQFADALEPPLRVAKPNKLELISMDLPMVSGERIHCLDILFAFTKRVL
GEGGEMDILRGQMEERFMASNPSKLSYEPITTTLRRKQEDTSAVVIQRAYKQYARRNAAV
KSSNTASDNNQKDETIIEQDNLVADKLKEISSADKSELTPSTTAQPSSNSVTTNGKNKYE
KDKREKEVLCKDVSEQDL
NT seq
5997 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccaccaggtccagacagcttccgcccctttagtcgtgagtcc
ctcaaagccatcgagaggcggatcgctgaggagaacgccaagaagcccaagggagagaaa
agaaaacgcactgatgacaatgggctcaagcccagccgtgacctggaggcgggcaaatca
ctcccatttctctatggggacattcctaaaggcatggtgtcgacaccgctggaggacctg
gatccctactactgtaatcagagaactttcatagtattaaacaaagggaatttcatcttc
cgcttcaacgccgctcctgccttgtacctcctgagccccttcaaccttcttagaaggata
tcaattaggattttggtgcacaaattgttcagcattgtgattatgtgcactatcattgcc
aactgtggatttatgacactgagtaacccccctgactggaccaagaatgtagagtataca
tttactgcaatctacacgtttgaatccctcattaaaattttagctcgagggttctgcata
gggaagttcacatttcttagagatccctggaactggctggatttcagtgtcattgtcatg
gcgtatgtaaccgagtttgtaaacctaggcaatttttcagctctgcgcacattcagagtg
ctgagagcttttaaagctatttcagttatcccaggcctgaagaccatcgttggtgcgttg
ttccagtcagtgaagaagcttgccaatgtgatgatcctcaccgtgttctgcttgagtgtc
ttcgcccttatagggttacaactgtttatgggcacattaaagcagaagtgtgtgcggaaa
atggcaaattccaccttgaatggtacatcatatattgagacctacatgaatggaacaggc
cagaaagtcttcaacaagactgcgtatttgcttgatacgcgtaattattattaccttcca
ggcaaacgagatccattgctttgtggaaatggcagtgcagctgggcattgtccggatggg
tttgaatgcatcaaagtgggaactaacccagactatggctacaccagctttgactcattc
ggttgggccttcctctctctgtttagattgatgacacaggacttctgggaaaacctttac
cagcagacgttgcgggcagctgggaagccctacatgatcttttttgtgctggtgatattc
ctcggttccttctaccttatcaacctgatccttgctgtagtagctatggcctatgaggag
cagagccaggccacaataaaagaggcgaggcagaaggaggaggagtttcaggacatgctt
gagcagttgaaacggcaacaagaggacgctcaggcagcagcaactgcagctgcttcagag
agcgaggaggttggtggcaaagttggtggcattgagagctcctctgacacttccaagctc
agctccaaaagtgctaaagagagacgcaacaggcgaaaaaaaagaaaggaggaggagggc
aaaggggctgatgagaagtttcctaaatccgagtcacaggacagtataaagaaagcccgc
tgccgcttctctgtggatgcaaacctgctcagctatgatatgaaatgctcatctgcacat
cagtcctttctgagtttccgtggacccctgttctcgtccagacggaacagcaggaccagc
ctttttagtttccgaagccaagcacaggacatgggctcagaaaatgagtttgcggatgat
gagaacagcatttttgaagacaacttgagtcggaggggctctttgtttattccacggcat
tgtgatagacgcgccagcagtatgagccactgcagcttcttgtcacatctcctacttccg
accaatgggatcaagcacagctctgtagactgcaatggggttgtgtctctggtgggtggg
cagtcactcccatcatcacctgtggggctccttctgcctaaagtgacggtagacatggcc
tccacccaagacattgttgacaccactgacacagagtacagacaggccggtggaggaaca
caacaagagtctatggacttcctggagggcccagaggccaggcagagagctcatagtata
gctagtgtcataacaagcacaatggaggagcttgaagagtcgaggcagaagtgtcctcct
tgctggtacaaatttgccaacaccttcctcatctgggaatgttgtcctgcatggctcaag
atcaagaaagtggttaaactaattgtgatggatccttttgtggacctaaccatcaccatc
tgcattgtactgaacacactgtttatggccatggagcattatccaatgacagggggtttc
aacaatacactgtctgtgggcaataaggtattcactggcatcttcacggctgaaatggtc
ctcaagattgttgctttggatccatactattactttcagatgggctggaacatttttgat
ggaattattgttagtttaagcttgatggagctttgtttggaaaatgtggttggcatgtct
gtcctgagatcattcagattgctgagagtattcaagttggctaagtcatggcccactctt
aacacgctgatcaaaataattggtaattcagtgggggctttgggcaacttgacgctggtg
ctggccattatcgtcttcatctttgctgtggtgggcatgcaactatttggaaaatactac
aaggactgtgtgtgtaaaatctctgaggactgcactctgccccgttggcacatgaatgac
ttcttccattcattcctcattgtgttccgagtgctgtgtggagagtggatagagaccatg
tgggactgtatggaggtggctgggacgaccatgtgcatcattgtctacatgatggtcatg
gttattggaaaccttgtggtgctgaacctgtttctggccctgctgctgagttccttcagt
gctgacaacctggcagcaacggaagatgacagcgacatgaacaatttgcaggttgccctt
gggcgaatccataaaggcattgccttcgctaagtccctgcttcgaagcagctgcaacagt
gtttgtctaagaagaaagaagaaaggaaaggataaggacaaatctctggatgagctccac
aggtctttagggccgaatggtgtccccaaccataccctcaaagactttcctggcaacggg
gatgtgactggcgtggacaaaaatggagacaagtacatagtctacagcaagagtgatgat
tctattatgtctttcatcaacaatcctagtctgactgtcagtgttcctattgctgtggga
gagtctgactttgaaaacctcaacacagaggacttcagcagtgcctcgtctgatgcagca
ggatgccatgtgcttatagatgacgatgaccagttcagctcctctgagggcagcacagtg
gatggtatggcaggtggggagggaggacagtctgtagactttgaactggaagaatgtatg
gaccctgatgcctgctttcccgacggctgtgtgcaaaagttccagtgttgtcaggtaaat
acggaggtgggctggtggaaggtgtggtggactctaagaaagacctgttaccggatagtg
gaacacaactggtttgaaagcttcatcatcttcatgatcctacttagcagtggggcactg
gcatttgaagacatctacattgagaagaggaagaccattaaaacaatgttggagtttgca
gacaaaatcttcacctatatcttcattctggagatgctactgaagtgggtggcgtatgga
tttgccaagtatttcacaaatgcctggtgctggctggacttcctcattgttgatgtctca
ctggtcagtatggtagccaatgccatcggatattcggacctcggtcccatcaagtctctg
agaaccctgcgagctctgaggcccctgagagccctgtcacggttcgaaggcatgagggtg
gttgtcaatgccctgctgggagccattccttccatattcaatgtgctgctggtatgtctc
atcttctggctcatcttcagcatcatgggagtcaacttatttgcggggaagtacggccgt
tgtgtcaacaaaaccacagacaagcctttccttccatcagaggtgaaaaacatgaatgat
tgtttggccaaggacctagaactagttcgctggaagaacgtcaaagtcaactttgataat
gttggctttggttaccttgcactgctgcaagtggctacattcaagggctggatggacatc
atgtatgctgctgtagattctcaaaacaagcaagaagaacaaccagagtatgaggtcaac
ctgaagatgtacctatattttgttgttttcatcatatttggagccttcttcacgctcaat
ctcttcattggtgtcatcatagacaatttcaatcagcaaaagaaaaagctaggaggtcaa
gacatcttcatgactgaagaacagaagaaatactacaatgccatgaaaaagttggggtcg
aagaaaccacaaaaacctattcctagaccatcaaacaaaattcaaggatacttttttgac
ctcacctcaaaacaagcattcgatattgtaataatggttctaatatggctaaatatggtg
gccatgatggtggaaactgatgaccagtcagaagaaacggccaaaattctcaacaggata
aatgaagtgttcatttgcgtcttcactggagagtgtttgttgaagataatctcgcttcgc
cagtactatttcacaaatggttggaatgtatttgatttcatcgtagtcatcctgtcaatc
cttggtttgtttctcgcagaggtgataaagaggtattttgtttcgcctaccttgttcaga
gtcatccgattggctcggattggccgagtcctccgtcttattaaaagtgccaaaggaatt
cgcacactcttgtttgccttgatgatgtcactccctgccttgttcaacattggtctcttg
ctgttcttggtgatgtttatctatgccatctttggcatgtcaaactttgcttacgtcaag
cacgaagcaggcattgatgaccttttcaattttgagacatttggcaacagcatgatctgt
ttgtttcagatcaccacctcagcagggtgggatggcctactagctcccattctcaataca
gataaagaagattgtagcaattccactgagcaccctggcagtcctactacaggaaactgt
ggaaatcctcctgtgggaattgctttctttgtgagctacatcatcgtctgtttcctgatt
gtggtgaatatgtacattgcagtcatcctggaaaacttcagtgtggccacagaggagagc
gcagacccactaagtgaagatgattttgaaatgttttatgaggtctgggaaaggtttgat
cctcatgcaacacaattcatggagtactataaactgtcacaatttgcagatgctctggaa
ccaccattacgtgtagccaaacctaacaagcttgaactgatctctatggatctacccatg
gtgagtggtgaacgcattcactgcctggacatcctgtttgcattcacaaaacgtgttctg
ggcgaaggtggggagatggacatcttaagggggcaaatggaggagcgcttcatggcctcc
aatccttccaaattgtcgtacgaacccatcactaccacgctccgccgcaaacaggaggac
acatcagccgttgtcatccagagagcatacaaacagtatgcaaggagaaatgctgccgtt
aagtcctctaacacggccagtgataacaatcaaaaggatgaaacaatcattgaacaagac
aatcttgttgcagacaaactcaaagaaatttctagcgcagataaaagtgaactgacacct
tcaacgacagctcaaccctcatctaacagtgtgacaacaaatggaaaaaacaaatatgaa
aaagacaaaagggaaaaggaggtcttgtgcaaagatgtcagtgagcaagatctgtaa
DBGET
integrated database retrieval system
