KEGG   Micropterus salmoides (largemouth bass): 119907149
Entry
119907149         CDS       T07309                                 
Name
(RefSeq) replication protein A 32 kDa subunit-like isoform X1
  KO
K10739  replication factor A2
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03030  DNA replication
msam03420  Nucleotide excision repair
msam03430  Mismatch repair
msam03440  Homologous recombination
msam03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119907149
   03420 Nucleotide excision repair
    119907149
   03430 Mismatch repair
    119907149
   03440 Homologous recombination
    119907149
   03460 Fanconi anemia pathway
    119907149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msam03032]
    119907149
   03400 DNA repair and recombination proteins [BR:msam03400]
    119907149
DNA replication proteins [BR:msam03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    119907149
DNA repair and recombination proteins [BR:msam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     119907149
   MMR (mismatch excision repair)
     119907149
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     119907149
SSDB
Motif
Pfam: RPA_C CofD
Other DBs
NCBI-GeneID: 119907149
NCBI-ProteinID: XP_038580702
LinkDB
Position
Unknown
AA seq 253 aa
MWNQACSQSPVGVTSHKAVISKRAALHILPCTVSQLLSASQVSNDTFAVCNWELNQVSIV
GLLRGFAPFVTNIQYSVDDMTGPPLNVKQWVNATEDCALTFASPGVYVKVTGTLRSFNGQ
RSLMAMNIYCLKDPNEITSHMLEVVQAHMQIFRKAFDVNMNTTASSLSGGLLGHSGGGHP
VDILPNGLSTIQEQVLHVIKRFSVRDDGISFQDLKTQLDYLSTKDLRTSLAFLINEGHVF
STIDEHHFKSSEP
NT seq 762 nt   +upstreamnt  +downstreamnt
atgtggaaccaagcttgcagtcagtcccctgttggggtgaccagccacaaagcagtgata
tcaaagagggctgctcttcacattttgccctgcacagtttctcagctgctgtcagcttct
caagtcagcaatgatacctttgcagtctgcaactgggaactcaaccaggtgtccatagtg
ggcctcctcagaggatttgctccctttgtgactaacatccagtattctgtggatgacatg
actggtccacctttgaatgtgaagcagtgggttaacgccacagaggactgtgctctgacg
tttgcgtctcctggagtatatgtaaaggttactggaacgctgcgcagtttcaatggtcaa
aggtcattgatggcaatgaatatctactgtctcaaagacccgaatgagatcacatcccac
atgttggaagtggtacaagcccatatgcagatttttcgaaaggcatttgatgtcaatatg
aataccactgcttcctcgctgtctggaggactccttgggcatagtggaggtggacatcct
gtagacatcttaccaaatggtttgtccactatccaggaacaggtgttgcacgtaatcaaa
aggttctctgtccgtgatgatggcatcagtttccaagacctgaagacgcagctggactac
ttaagtacaaaagacctcagaacctccttggcgtttctaataaatgaaggtcacgtcttc
tctaccattgatgagcatcatttcaagtcatcagaaccttaa

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