Micropterus salmoides (largemouth bass): 119908029
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Entry
119908029 CDS
T07309
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119908029 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119908029 (exosc7)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119908029 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119908029 (exosc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119908029
NCBI-ProteinID:
XP_038581695
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTAVLV
GIKAEIGKPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSMD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISADDEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCTR
KVGGGSLDPESIFEMTEAGKRVGKALHAPLMKLLQQEESLGTKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtacaagttagcgaggctgaaaaagtgtacattttacacggtatacgggat
gacttacgagtggacggaagaggctgcgaggactatagacacatggaaatagagaccgac
gtggtgtccaacacagacggctcggccaaagtcacactgggacacacagcggttctagtt
ggaattaaagctgaaattggaaaaccaaggcccatggtgccagatgaaggctacttggag
ttctttgttgattgttcggccaatgcaacccctgagtttgagggcagaggtggtgaggag
ctggggacagagctgagtaacacactctacaaagtcttcaacaacaaacacagcatggac
ctgaagagcctctgtatcagtgcaggagaacactgctgggttctctatgtggatgtgctg
ctcctgcagtgtgacggaaacctgtacgatgccatctcagtagctatcaaagcagctctc
ttcaatacaaaaattcccagagtgcacatatcagctgacgacgaaggagggaaggaaatt
gagttgtcagacgacccatatgactgcatgagactcaatgtagaaaacgttccttgtata
gtgacgttgtgcaaggtgggccaccgacacgttgtggacgcgactctgcaggagaaggcc
tgttctgtggcgagcctgatcatctctgtcacacacaagggcacggtcacctgcacgagg
aaggtgggcggaggaagcctggatccagagagcatcttcgaaatgacagaggcaggtaaa
cgggtcgggaaggctcttcatgctccgctcatgaagctgctgcagcaggaggagagtttg
ggaacaaagcgacaaaaagttggcttccttggttaa
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integrated database retrieval system