KEGG   Micropterus salmoides (largemouth bass): 119908029
Entry
119908029         CDS       T07309                                 
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119908029 (exosc7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119908029 (exosc7)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     119908029 (exosc7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     119908029 (exosc7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 119908029
NCBI-ProteinID: XP_038581695
LinkDB
Position
Unknown
AA seq 291 aa
MATVQVSEAEKVYILHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTAVLV
GIKAEIGKPRPMVPDEGYLEFFVDCSANATPEFEGRGGEELGTELSNTLYKVFNNKHSMD
LKSLCISAGEHCWVLYVDVLLLQCDGNLYDAISVAIKAALFNTKIPRVHISADDEGGKEI
ELSDDPYDCMRLNVENVPCIVTLCKVGHRHVVDATLQEKACSVASLIISVTHKGTVTCTR
KVGGGSLDPESIFEMTEAGKRVGKALHAPLMKLLQQEESLGTKRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcaacagtacaagttagcgaggctgaaaaagtgtacattttacacggtatacgggat
gacttacgagtggacggaagaggctgcgaggactatagacacatggaaatagagaccgac
gtggtgtccaacacagacggctcggccaaagtcacactgggacacacagcggttctagtt
ggaattaaagctgaaattggaaaaccaaggcccatggtgccagatgaaggctacttggag
ttctttgttgattgttcggccaatgcaacccctgagtttgagggcagaggtggtgaggag
ctggggacagagctgagtaacacactctacaaagtcttcaacaacaaacacagcatggac
ctgaagagcctctgtatcagtgcaggagaacactgctgggttctctatgtggatgtgctg
ctcctgcagtgtgacggaaacctgtacgatgccatctcagtagctatcaaagcagctctc
ttcaatacaaaaattcccagagtgcacatatcagctgacgacgaaggagggaaggaaatt
gagttgtcagacgacccatatgactgcatgagactcaatgtagaaaacgttccttgtata
gtgacgttgtgcaaggtgggccaccgacacgttgtggacgcgactctgcaggagaaggcc
tgttctgtggcgagcctgatcatctctgtcacacacaagggcacggtcacctgcacgagg
aaggtgggcggaggaagcctggatccagagagcatcttcgaaatgacagaggcaggtaaa
cgggtcgggaaggctcttcatgctccgctcatgaagctgctgcagcaggaggagagtttg
ggaacaaagcgacaaaaagttggcttccttggttaa

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