Micropterus salmoides (largemouth bass): 119918210
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Entry
119918210 CDS
T07309
Symbol
cacna1c
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C isoform X1
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam04010
MAPK signaling pathway
msam04020
Calcium signaling pathway
msam04260
Cardiac muscle contraction
msam04261
Adrenergic signaling in cardiomyocytes
msam04270
Vascular smooth muscle contraction
msam04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119918210 (cacna1c)
04020 Calcium signaling pathway
119918210 (cacna1c)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
119918210 (cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
119918210 (cacna1c)
04261 Adrenergic signaling in cardiomyocytes
119918210 (cacna1c)
04270 Vascular smooth muscle contraction
119918210 (cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msam04040
]
119918210 (cacna1c)
Ion channels [BR:
msam04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
119918210 (cacna1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
Motif
Other DBs
NCBI-GeneID:
119918210
NCBI-ProteinID:
XP_038594756
LinkDB
All DBs
Position
Unknown
AA seq
2218 aa
AA seq
DB search
MMGSAATSGGAGLGSGGGGPISTASSTQRKRQHYSSKPKKQTTTTATRPPRALLCLTLKN
PIRRACISIVEWKPFEIIILMTIFANCVALAVYIPFPEDDSNATNSNLERVEYLFLIIFT
VEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKGDGGTPIGGKAAGF
DVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFM
GKMHKTCVYEHIGTIAEEKPAPCAPDGAYGRHCKHNGTECKMGWEGPNDGITNFDNFAFA
MLTVFQCITMEGWTDVLYWVNDAVGYKWPWVYFVTLIIIGSFFVLNLVLGVLSGEFSKER
EKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGLDDDKPRNLSMPASENE
SVNTDNAPGGDVEGETCCTRLANRISKSKFSRYSRRWNRLCRRKCRAAVKSQVFYWLVIF
LVFLNTLTIASEHHQQPQWLTDVQDIANKVLLALFTGEMLLKMYSLGLQAYFVSLFNRFD
SFVVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIA
SLLLLLFLFIIIFSLLGMQLFGGKFNFDETRRSTFDNFPQSLLTVFQILTGEDWNSVMYD
GIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKE
RKKLARLASPEKRHNNEKPPLKEEKKEKIELKSITSDGETNTATKQINMDEYCGDESEEK
NPYPANDYIGDDDEDEPEMPVGPRPRPLSDIQLKEKAIPMPEARAFFIFSHTNKFRVLCH
KIVNHNIFTNLILFFILLSSISLAAEDPVKNDSFRNQILGYADHVFTGLFTIEIILKMTA
YGAFVHKGSFCRNYFNILDLVVVSVSLISSGIQSSAINVVKILRVLRVLRPLRAINRAKG
LKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKFFFCSDSSKQTQADCRGFYI
KYKDGDVGKPERDPRKWENSDFNFDDVLQGMMALFAVSTFEGWPGLLYRAIDSHTEDVGP
IYNYRVVISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYAL
KARPLRRYIPKNPYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQTKNFNDAMNIL
NMLFTGLFTVEMILKLIAFKPRGYFSDPWNVFDFLIVIGSIIDVILSEINPADSSSSSSS
SSSSSSSSSSSSHPPVVRPMVRSDGNLVRLPTSSTIPPSFHPSIPPPATPTMGLQNSEEN
ARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQ
MFGKIALQDNTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACSPKRPCEKGSTNENN
TSSEDCGSQFAIIYFVSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIW
AEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNAT
LFALVRTALRIKTEGNLEQANEELRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYAT
FLIQEYFRKFKKRKEQGLVAKVAPKTALSLQAGLRTLHDIGPEIRRAISGDLTVEEELDK
GLKEPVSAASEDDIFRRTGGLFSNHVNYYNQSDGRGSFPQSFTTQRPLHISQKGSPCEGE
SPSHEKLMDSTTFTPSSYSSSGSNANINNANNTGMVGVVTQGISRFPSPSISTVDGHTGQ
PLTPILLPRSAWCFPPKSSDSSDSRLPIIRRGEGSTEETYDESYGDDREYHEDDHSLSSD
MLVYHDDTCKQLTPMEEGEQVEDRRGGGGWQSPRRVFLCPTSLGRRSSFHLECLRRQSKT
DVSQKTSVPLHLVHHQALAVAGLSPLLRRSHSPTLFSRLCSSPPASPTALGSDASYQRVP
SLRLEGTNSHEKLNTSLPSVNCGPWYSDSNGNSRVPSPSPSVSGSNQRPPRPVSLTVPSL
LGKDSSSLSRGSAGSLVEAVLISEGLGHFAQDPSFIEATKAELADVCDMTIEEMEHAANN
ILNGNSATNTTSGTSSTSQHSPNSNLLPFHTAAAATQRDRVLSEGGGEAGGSRGSVHGPS
SVEERQELLAGVRGREEEEEEAEGREEGHSRSLVVIEGARQRNSGLLDDEDMECVTSL
NT seq
6657 nt
NT seq
+upstream
nt +downstream
nt
atgatgggcagcgccgcgacgagcggaggggcggggctggggtcaggagggggcgggccc
atttccacggccagctccacgcaaaggaagagacaacactatagctctaagcccaagaaa
cagacaacgacgacagccacaaggcccccacgagccctactctgtctcacactcaagaac
cccatccgcagggcctgcatcagcattgtagagtggaaaccatttgagatcatcatcctg
atgaccatttttgccaactgtgtggccttagccgtctacatccccttcccagaggatgac
tcgaacgccaccaactccaacctggagcgtgtggagtatctgtttctcatcattttcacg
gtggaggcattcctgaaggtaatagcctatgggctgctcttccaccctaacgcctacttg
aggaacggctggaatctgcttgacttcatcattgtagtcgtagggttattcagtgcgatc
ttggagcaggccaccaagggggacggcggcactcctattggagggaaggcagcaggcttt
gatgtcaaggctctgagagcattcagagtactcagacccctcagactggtctctggagta
cccagtttacaggtagtgttgaactccataatcaaagccatggttcctcttctccatatc
gccctgctggtcctctttgtcatcatcatctatgccatcatcggcctggagctcttcatg
ggcaagatgcacaagacctgcgtttacgagcatataggcaccattgcggaggaaaagccg
gcaccttgtgcaccagacggagcttacggtcgacactgtaaacataacggaacagagtgc
aaaatggggtgggagggcccaaacgacggcatcaccaactttgacaactttgcctttgcc
atgttgactgtgttccagtgtataaccatggagggctggacggatgtgctgtactgggtg
aatgatgcagtagggtacaagtggccctgggtgtattttgtcaccttaatcatcatcgga
tccttctttgtgctaaacttggttctgggggtattgagcggagagttctccaaggagagg
gagaaggccaaggcacgtggtgacttccagaaactcagagaaaaacagcaactggaggag
gacctcaagggctatttagactggatcactcaggctgaagacattgacccagagaatgaa
gaggagggcttggatgatgacaaacccagaaacctgagcatgccagccagcgagaatgaa
tcagtcaacacagacaacgcccccgggggagacgtggagggagagacctgctgtacccgg
ttagcaaataggatctccaaatccaagttcagtcgatactctcggaggtggaacaggctg
tgtaggaggaagtgccgggcagcagtcaaatcacaggttttctattggttggtcatcttc
ctggttttcctcaacactctgaccatcgcctctgaacatcaccagcagcctcagtggtta
actgatgtacaagacatagccaacaaagtcttgctagcactcttcactggtgagatgctg
ttgaagatgtacagtctgggtctacaggcgtactttgtttcgctcttcaatcgcttcgac
agcttcgtagtatgtggaggaattcttgagaccattttggtggaaaccaagatcatgtct
cctcttggcatctctgtgttacgttgtgtacgcttgctgcgaatattcaaaataaccaga
tactggaactccctgtccaacctggtggcctctctgttaaactctgtacgctccatcgct
tccctgctgctcctgctgttcctcttcattatcatcttctccctgctcggcatgcagctc
tttggggggaaattcaactttgacgagacccgacgcagcacctttgacaactttccccag
tctctgctcactgtgtttcagatccttacaggagaggactggaactctgtgatgtatgat
ggtatcatggcgtacggtggaccatcattccccggcatgctggtctgcatctacttcatc
atcctcttcatctgcggaaattatatcctactgaatgtcttcttggccatcgctgtagat
aatctggcagacgctgagagcctgacatccgcccagaaagaagaggaagaggagaaggag
aggaaaaagctagccagattggccagtccagagaagcgtcataacaatgagaagccgcct
ctgaaggaggagaagaaagagaagatagagctgaagtccatcacctctgatggagagacc
aacactgctactaagcagattaacatggatgagtactgtggagatgagagtgaagagaag
aacccatatcctgccaatgattacataggggacgatgatgaggatgagccagagatgcca
gtgggcccgaggcctcggccactttccgacattcagttgaaggaaaaagccattcccatg
cctgaggcccgtgctttcttcatcttcagccacaccaacaaattcagagttctgtgccat
aagatcgtcaaccacaacatctttaccaacctcatcctcttcttcatcctgctcagcagc
atcagtctggcagcagaggacccagtcaagaatgactccttcagaaaccagatcctgggc
tatgcagaccatgtctttactggactcttcaccatagagataattcttaagatgacagcc
tatggagccttcgtccataaaggttcattctgtagaaactatttcaatatcctggacctg
gtggtggttagtgtgtccctcatctcctctggaatacagtccagcgcaattaacgtggtg
aagatcctgagagttctgcgagtgctcagaccactgagggctatcaacagagccaaggga
ctaaagcatgtagttcagtgcgtgtttgtagccatcaggaccatcggcaacattgtcatc
gtcactacgttgctccagttcatgttcgcctgtattggagtacaactctttaagggcaag
ttcttcttctgttccgacagctctaaacaaactcaggcagattgcagaggtttctacatt
aagtataaggacggtgatgtggggaagcctgagagagacccgagaaagtgggagaacagt
gactttaactttgacgatgtcctgcaaggcatgatggctctgtttgctgtgtctaccttt
gagggctggccagggttactgtaccgagccattgactctcacactgaagacgtcgggccc
atctacaactaccgcgtggtcatctccatctttttcataatctacatcatcatcattgcc
ttcttcatgatgaacatcttcgtcggtttcgtcatcgtcacattccaggagcaaggagaa
caagaatataaaaactgtgagctggacaagaaccagcggcagtgtgtggagtatgctttg
aaggcacgtccgctgcgacgttacattcccaagaacccctaccagtacaaggtgtggtat
gtggtcaactccacctactttgagtacctgatgttcacactcatccttctcaacaccatc
tgtctggccatgcagcatcatggacagaccaaaaatttcaatgatgccatgaacatcctc
aacatgctcttcactggactcttcactgtggagatgatccttaaactgatagccttcaaa
cccagggggtactttagtgatccctggaatgtgtttgatttcctcatcgtaattggcagc
ataatagacgtcattctcagtgagatcaacccagctgactcctcctcgtcctcgtcctcc
tcctcttcgtcctcctcctcctcctcttcctcctctcacccccctgtggtaaggccaatg
gtacgctccgacggtaacctcgtccgcctccctacctcctccaccatccctccatccttc
catccttccatccctcctcctgctacgccaaccatgggactgcagaactctgaagagaac
gccaggatctccatcaccttcttccggctgttccgcgtgatgaggctggtgaagctgctg
tctcgcggggaagggattcggaccctgctgtggaccttcatcaaatccttccaagcactg
ccctacgtagctctgcttatagtgatgctattcttcatatacgctgtcatcggtatgcag
atgtttggtaagatagcactgcaggacaacacgcagatcaacaggaacaacaatttccag
acattccctcaggcagtgctgctgctcttcagatgtgcaacaggtgaggcatggcaggag
atcatgctggcatgctcgcccaaacggccgtgtgagaaaggatcaaccaatgagaacaac
acatccagcgaggactgtggcagccagtttgccatcatttactttgtcagcttctatatg
ctctgtgcctttctgatcatcaacctgtttgtggctgtcattatggacaactttgactac
ctgacacgtgattggtcgatcctggggccacatcatcttgatgaattcaagaggatctgg
gctgaatatgacccagaagctaaggggagaataaagcacctggatgtggtgactctgctg
cgaagaatccagcctcccctgggttttggaaagctctgtccacacagggtggcctgcaag
cgtctggtgtcgatgaacatgcctctgaacagcgatggaacagtgatgttcaacgccaca
ctttttgccctggtcagaaccgcactcaggatcaagacagaaggtaacctcgagcaggcc
aatgaggaactgagggcaatagtgaagaagatctggaagagaaccagcatgaagctcttg
gatcaagtagtgccccctgctggtgatgatgaggtaacagtcgggaagttctacgctacc
ttcctcatccaggaatatttccgcaagtttaagaagaggaaagaacaagggctggtggcc
aaggtggcccccaaaactgccctctctctgcaggctggcctgcggacattgcatgacatt
ggtccagagattcggagggccatctctggagacctgaccgtggaggaggagctggataaa
ggtctaaaggagcctgtgtcggctgcgtccgaggacgatatcttcaggcgtacaggtggg
ttgttcagcaaccacgtcaactactacaaccagagcgatggccgcggttccttcccacag
tccttcactacccagcgtcccttgcacatcagccagaagggctctccttgtgaaggcgag
agcccgtcccacgagaagctcatggactcgaccactttcaccccttcctcttattcttca
tcaggctctaatgccaacatcaacaatgccaacaacactggcatggttggggtggtgacc
cagggaatcagtcgattcccaagcccgtccataagcactgtggacgggcacacagggcag
ccgctcacccccatcctgctgccaagatccgcgtggtgctttcctccaaagagctcggac
tcaagtgacagccgccttccaatcatccgaagaggcgaggggtcaacggaggagacctac
gatgaaagctacggtgacgatagggagtaccacgaggacgaccactcgctctcctctgac
atgctggtgtatcatgatgatacatgtaagcagttgactcccatggaggaaggagagcag
gtagaagacagaagaggaggaggaggttggcagtctcccaggagagtcttcctctgcccc
acttctctggggcggagatcatccttccacctggagtgtctcaggagacagtcaaagaca
gatgtctcccagaagacgtctgtaccgctacaccttgtacatcatcaggctttggctgtc
gcagggttgagtcctctgctaagaaggagtcattcgcctaccctcttcagccggctatgc
tcctcgcctccagccagtcccacagcccttggcagtgatgcttcctaccagcgagtgccc
tctctgaggctagagggcactaactcccatgaaaagctcaataccagtttgccctctgtc
aactgtgggccatggtacagcgacagtaatgggaacagccgggtgcccagtcctagcccc
agcgtgtctgggtccaatcaaagaccaccacggccggtgtcgctcacagtgccctcgcta
ctgggaaaagactccagctcactgtctcgcggaagcgcaggcagtctggtggaggcggtg
ctaatatcagagggtttgggtcatttcgcccaagacccgtcgttcattgaggcgactaaa
gccgagttggctgacgtctgcgacatgaccatcgaggagatggagcatgccgccaacaac
attctcaatggcaacagcgccacaaacaccacatctggcacctcctccacctcccagcac
agccccaacagcaacctcctccccttccacacagcagctgcagcaacgcaaagggaccga
gtgctcagcgagggcgggggagaggccggtggaagcagaggctccgttcacgggccgtcc
tcagtggaggagcggcaggagctgctagcaggagttaggggacgagaagaggaggaggaa
gaggcggaagggagggaggaggggcacagcagaagcttggttgtgattgaaggagcgcga
cagagaaacagcggactgttggacgacgaggatatggagtgtgtgacgagtttgtag
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integrated database retrieval system
