Mycolicibacterium smegmatis MC2 155: LJ00_00030
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Entry
LJ00_00030 CDS
T03433
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
msb
Mycolicibacterium smegmatis MC2 155
Brite
KEGG Orthology (KO) [BR:
msb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msb03032
]
LJ00_00030
03400 DNA repair and recombination proteins [BR:
msb03400
]
LJ00_00030
Enzymes [BR:
msb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LJ00_00030
DNA replication proteins [BR:
msb03032
]
Prokaryotic type
DNA Topoisomerases
LJ00_00030
DNA repair and recombination proteins [BR:
msb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LJ00_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
TPD52
Nnf1
Motif
Other DBs
NCBI-ProteinID:
AIU05292
LinkDB
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Position
6648..9176
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AA seq
842 aa
AA seq
DB search
MTDTTLPPEGEAHDRIEPVDIQQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAM
YDSGFRPDRSHAKSARSVAETMGNYHPHGDASIYDTLVRMAQPWSLRYPLVDGQGNFGSP
GNDPPAAMRYTEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSG
GIAVGMATNIPPHNLGELAEAVYWCLENYEADEEATCEAVMERVKGPDFPTSGLIVGTQG
IEDTYKTGRGSIKMRGVVEIEEDSRGRTSIVITELPYQVNHDNFITSIAEQVRDGKLAGI
SNIEDQSSDRVGLRIVVELKRDAVAKVVLNNLYKHTQLQTSFGANMLSIVDGVPRTLRLD
QLIRLYVDHQLDVIVRRTRYRLRKANERAHILRGLVKALDALDEVIALIRASQTVDIARA
GLIELLDIDDIQAQAILDMQLRRLAALERQKIVDDLAKIEAEIADLEDILAKPERQRGIV
RDELKEIVDKHGDARRTRIVPADGEVSDEDLIAREDVVVTITETGYAKRTKTDLYRSQKR
GGKGVQGAGLKQDDMVNHFFVCSTHDWILFFTTQGRVYRAKAYELPEASRTARGQHVANL
LAFQPEERIAQVIQIKSYEDAPYLVLATRNGLVKKSKLSDFDSNRSGGIVAINLREGDEL
VGAVLCSAEDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNEDDRLLSLNVVRP
DTYLLVATSGGYAKRTSIDEYSVQGRGGKGILTIQYDRKRGSLVGALIVDDDTELYAITS
TGGVIRTAARQVRKAGRQTKGVRLMNLAEGDTLIAIARNADEDEAAESISESDADTAESP
EA
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgactgatacgacgctgccgccggaaggcgaggcgcacgaccggatcgaaccggtcgac
atccagcaggagatgcagcgcagctacatcgactacgccatgagcgtgatcgtgggccgc
gcgctgcccgaggtgcgcgacggtctcaagcccgtgcaccgccgcgtgctgtacgcgatg
tacgactcgggcttccgtccggatcgcagccacgccaaatccgcgcgctccgttgccgag
acgatgggtaactaccatccgcacggcgacgcctcgatctacgacaccctggtccgcatg
gcccagccgtggtcgttgcgctacccgctggtggacggccagggcaacttcggctcgccg
ggtaacgatccgccagcggccatgcgttacaccgaagcgcgactcactccgttggcgatg
gagatgttgcgtgaaatcgacgaggagacagtcgatttcatcccgaactacgacggacgg
gtgcaggagcccacggttctgccgagccggttccccaacctgttggccaacggttcgggc
ggtatcgccgtgggcatggccaccaacatcccgccgcacaacctcggcgagctcgcggag
gccgtgtactggtgcctggagaattacgaggccgacgaggaagccacctgcgaggccgtg
atggagcgggtcaagggacccgacttccccacgtccggcctgatcgtgggcacccagggt
atcgaggacacgtacaagaccggccgcgggtcgatcaagatgcgtggcgtcgtcgagatc
gaggaggacagccggggacggaccagcatcgtcatcaccgagctgccctaccaggtcaac
cacgacaacttcatcacctcgatcgccgagcaggtgcgcgacggcaagctcgcgggcatc
tcaaacatcgaggaccagtccagtgaccgtgtgggcctgcgaattgtcgtggagctcaag
cgcgatgcggtcgccaaggtggtgctgaacaacctctacaagcacacccagctgcagacc
agcttcggcgccaacatgctgtcgatcgtcgacggtgtgccgcgcacgctgcgcctggac
cagctgatccgcctgtacgtcgaccaccaactcgatgtcatcgtgcggcgcacccggtac
cggctgcgcaaggccaacgaacgggcccacatcctgcgtggtctggtcaaggcactcgat
gccctcgacgaggtcatcgcgttgatccgggcgtcgcagaccgtcgacatcgcgcgtgcc
ggcctgatcgagctgctcgacatcgacgacatccaggcccaggcgatcctcgacatgcag
ctgcgcaggctcgcagccctcgagcggcagaagatcgtcgacgacctcgccaagatcgag
gccgagatcgccgacctcgaggacatcctcgccaagcccgagcggcagcgcgggatcgtg
cgtgacgagctcaaggagatcgtcgacaagcacggcgacgcgcgtcggacccgcatcgtg
cccgccgacggcgaggtcagcgacgaggatctcatcgcccgcgaagacgtggtggtcacc
atcaccgagaccggctacgccaaacgcaccaagaccgacctgtaccgcagccagaaacgc
ggcggcaaaggtgtgcagggtgccggcctcaagcaggacgacatggtcaaccacttcttc
gtctgctcgacgcacgactggatcctgttcttcaccacacagggtcgcgtgtaccgggcg
aaggcgtacgagttgcccgaggcgtcccgcaccgcgcgtggccagcacgtcgcgaacctc
ctggccttccagcccgaggagcgcatcgcgcaggtcatccagatcaagagctacgaggat
gcgccctacctggtgctcgcgacccgcaatggtctggtgaagaagtccaagctgtccgac
ttcgactccaaccgctccggcggcatcgtcgcgatcaacctgcgggaaggcgacgaactg
gtcggtgcggtgctgtgctcggcagaggacgacctgctcctggtgagtgccaacggccag
tcgatccgcttctcggcgaccgacgaggcgctgcggcccatgggtcgcgccacctccggt
gtgcagggcatgcggttcaacgaggacgaccgcctgctgtcgctcaacgtcgtccggccc
gatacgtatctgctggtcgcgacatcgggtggctacgccaagcgcacctcgatcgacgag
tactcggtgcagggccgcggcggcaagggcatcctgacgatccagtacgaccgcaaacgt
ggcagtctggtcggagcgttgatcgtcgacgacgacaccgagctgtacgcgatcacgtcc
acaggtggtgtcatccgcactgccgcacgtcaggtccgcaaggctggtcgccagaccaag
ggcgttcgcttgatgaacctggccgagggcgacacactgattgccatcgcccgcaacgcg
gacgaggacgaggcggccgagtcgatcagcgaatccgacgcggacaccgccgagtcaccc
gaggcgtga
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