Methylocystis sp. SC2: BN69_0878
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Entry
BN69_0878 CDS
T02324
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
msc
Methylocystis sp. SC2
Pathway
msc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BN69_0878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msc03400
]
BN69_0878
DNA repair and recombination proteins [BR:
msc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BN69_0878
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BN69_0878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
UB2H
AAA_30
SWI2_SNF2
AAA_16
DUF87
Microtub_bd
Kinesin
Motif
Other DBs
NCBI-ProteinID:
CCJ06329
UniProt:
J7Q3V0
LinkDB
All DBs
Position
complement(946306..948870)
Genome browser
AA seq
854 aa
AA seq
DB search
MASPPKKPKDPARPTRAKAAKPEVAPLAPHLAQLLNPALAPGFGEAPQAAYDASSIHGLD
EEDIEKYGLGEGFHAGGGVEATAESLAQLLRLGDPNIRDQKPWTPHRPERPQKSEGGVRF
ELVSDYTPKGDQPAAIEELVKGIAAQERDQVLLGVTGSGKTFTMASVIERVQRPALILAP
NKTLAAQLYGEFKSFFPNNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSVNEQIDRMRHA
ATRALLERDDVIIVASVSCIYGIGSVETYTAMTFSVTLSEKLEQRQLVTDLVALHYRRTG
ADFTRGTFRVRGDTVDIFPAHYEDRAWRISFFGDEVESISEFDPLTGKKTVDLEFVKVYA
NSHYVTPRPTLLQSVKAIKDELRARLDELNRSGRLVEAQRLEQRTRFDLEMMEATGSCAG
VENYSRYLTGRRPGEPPPTLFEYLPDNALVFADESHVSIPQIGAMYKGDFRRKATLAEYG
FRLPSCMDNRPLRFEEWDAMRPQTVSVSATPGNWELNQTGGVFVEQVIRPTGLIDPIVEV
RPARAQVDDLLDEARATAQIGYRSLVTVLTKRMAEDLTEYLHENGVRVRYMHSDIDTIER
IEIIRDLRLGAFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSETSLVQTIGRAARN
VDGRVILYADQITGSMKRAMDETNRRRAKQEAYNLENNITPASIKRGIADILGSVAEQDH
VTIDTGYDIAPGHNLAATIADLEKRMKAAAADLAFEEAARMRDEIQRLQRAELLAEASPQ
FRASFGRGGRGAIRRDEAEKLATRAHKPTDADMGPHNFGGGEARPLGRPAPPPRVSPRSS
GGRPGTRTVKGKPK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccccccaaaaagcccaaagacccggcgcggccgacgcgcgccaaggcggcg
aagccggaggtcgcgccgctcgcgccgcatttggcgcagctgctcaatccggcgctcgcg
cccgggttcggcgaggcgccgcaggccgcctatgacgcctcttcgatccacggcctcgac
gaggaggacatcgagaaatacgggctcggcgagggctttcatgcgggcggcggcgtcgag
gccaccgccgagagccttgcgcagctgctgcgccttggcgacccgaacattcgcgaccaa
aagccctggacgccgcatcggcccgagcggccgcagaaatccgaaggcggcgtgcggttc
gaactcgtctccgactatacgccgaagggcgatcagccggcggcgatcgaggagctggtc
aagggaatcgcggcgcaggagcgcgatcaggtgctgctcggcgtcaccggctccggcaag
accttcaccatggccagcgtgatcgaacgcgtgcagcggccggcgctgattctcgcgccc
aacaagacgctcgccgcgcagctctatggcgaattcaagagcttctttcccaataacgcc
gtcgaatatttcgtctcctactacgactactatcagcccgaggcctatgtgccgcgctcg
gacacttatatcgagaaagaatcctcggtgaacgagcagatcgatcgcatgcgccacgcc
gcgacgcgcgcgctcttggagcgcgacgacgtcatcatcgtcgcctcggtctcctgcatt
tacggcatcggctcggtcgagacctatacggcgatgaccttttcggtcacgctcagcgag
aagctggagcagcggcagctcgtcaccgatctggtggcgctgcattaccgccgcaccggc
gccgacttcacgcgcggaactttccgcgtgcgcggcgacaccgtcgacattttcccggcc
cactatgaggatcgcgcctggcgcatcagcttcttcggcgatgaggtcgagtcgatttcc
gaattcgatccgctgaccggcaagaagaccgtcgatctcgaattcgtgaaggtctacgcc
aattcgcattatgtgacgccgaggccgacgctgctgcagtcggtcaaggcgatcaaggac
gagcttcgcgcgcgactggatgaactcaatcgctcggggcgtctggtggaggcgcagcgg
ctcgagcagcgcacccgcttcgatctcgaaatgatggaggcgaccggctcctgcgccggc
gtcgagaattattcgcgctatctcaccggccgcaggccgggagagccgccgccgacgctg
ttcgaatatctgccggacaacgcgttggtcttcgccgacgagagccacgtcagcattccg
cagatcggcgcgatgtacaagggcgacttccgccgcaaggcgacgctcgcggaatatgga
ttccgcctgccgtcctgcatggacaatcgcccgctgcgcttcgaggaatgggacgccatg
cggccgcagaccgtttcggtctcggcgacgccgggaaactgggagctcaatcagacgggc
ggcgtcttcgtcgaacaggtgattcgcccgacgggattgatcgatccgattgtcgaggtg
cgtccggcccgcgcccaggtcgacgatctgctcgacgaagcgcgggcgacggcgcagatc
ggctatcgctcgctcgtcaccgtgctcaccaagcgcatggcggaagacctgaccgaatat
ctgcacgagaacggcgtgcgcgtgcgctacatgcattccgacatcgacacgatcgagcgc
atcgagatcatccgcgatctgcggctcggcgccttcgacgtgctcgtcggcatcaatctg
ctgcgcgaaggtttggacatccccgaatgcggcctcgtcgcgatcctcgacgccgacaag
gaaggctttctgcgctccgaaacctcgctcgtgcagacgatcggccgcgccgcgcgcaat
gtcgacggccgcgtcatcctctatgccgatcagatcaccggctcgatgaagcgcgcgatg
gacgagaccaaccgtcgccgcgccaagcaggaagcatacaatctcgagaacaacatcacg
ccggcgtcgatcaagcgcggcatcgccgatattctcggctcggtcgccgagcaggatcat
gtgaccatcgacaccggctacgacatcgccccggggcataatctcgcggcgacgatcgcc
gatctcgaaaagcgcatgaaggcggcggcggccgatctcgccttcgaggaggcggcgcgg
atgcgcgatgaaattcagcggctgcagcgcgccgaattgctcgccgaggcgagcccgcaa
tttcgcgcctcctttggccggggagggcgcggcgccatacgccgtgacgaagcggaaaag
ctcgccacgcgcgcgcataagccgaccgacgccgacatggggccgcataatttcggcggc
ggcgaagcgcggccgttgggtcggcccgcgccgccgccgcgcgtttcgccgcgctcgtcg
ggcggcaggccgggcacgcgcacggtgaagggcaagccgaagtga
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