Myxococcus stipitatus: MYSTI_03025
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Entry
MYSTI_03025 CDS
T02436
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
msd
Myxococcus stipitatus
Pathway
msd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
msd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MYSTI_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msd03400
]
MYSTI_03025
DNA repair and recombination proteins [BR:
msd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MYSTI_03025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AGC44341
UniProt:
L7U643
LinkDB
All DBs
Position
3839394..3841334
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AA seq
646 aa
AA seq
DB search
MDVKLQEKLDALPTEPGVYLMKDRRGQIIYVGKAINLRSRVRSYFTRTGDTRVFVSLLDE
LLGDLETVLVHNEKEALLLENELIKKHRPRFNVLLKDDKQFISLRLDRTHAYPRLEVVRK
YERDGARYFGPYSSAGAIRETLRIINRYFRLRTCTDHVLANRKRPCLLFQIGRCPAPCVY
PVPEDDYHRSVDEVVMFLEGKASELVEGLRLRMKRASQDLKFEEAARVRDQLQAIERSLE
RQKVATTDFKDQDVFALHREGDRILFYVLWVRQGRLNGGQAFPFGSQEFPNEELLASFVN
LYYDQGSFVPEDVLLPLEPEDGTEGLEALLSERKGDRVRVLVPKRGEKHELVKMAEKNAE
QAFLERRRTKDETDQVLSRLQQRLGLRNFPRRMECFDISHFQGSAIVASQVAVTDGDADK
SRYRKYKIKTLEKQDDFASMYEVVTRRLKRGLEDGDLPDLLVIDGGKGQLASAHAAMKDL
GVETVDVVGLAKSRDLEVFDRDAESARSPERVFVVGRKDPIVLAQNSAEMFMLTRMRDEA
HRFAITFQKQVLRKSRVRSALEDIPGVGEVRRKTLLRHFGSLKRVNDASIEELAEVVGPA
MAERVHAGLHGHLDEEDEDPIREASLDDAQEPANEKSRGGSPPGAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgaagctccaggagaagctcgacgcccttcccaccgagcccggcgtgtacctg
atgaaggaccgccgggggcagatcatctacgtgggcaaggccatcaacctgcgcagccgc
gtgcgctcctacttcacgcgcaccggcgacacgcgggtcttcgtgtcgctcctggacgaa
ctcctgggcgacctggagacggtgctcgtccacaacgagaaggaggcgctgcttctcgag
aacgagctcatcaagaagcaccgcccgcgcttcaacgtcctgctcaaggacgacaagcag
ttcatctccctgcgcctggaccgtacccacgcctatccgcggctggaagtcgtgcgcaag
tacgagcgggatggggcgcgctacttcggcccgtactcgagcgcgggcgccatccgcgag
acgctgcgcatcatcaaccgctacttccgcttgcgcacgtgcacggaccacgtcctggcc
aaccgcaagcgcccctgtctgctgttccagatcggccgctgtccggcgccgtgtgtctac
ccggtccccgaggacgactaccaccgcagcgtggatgaagtggtgatgttcctggagggc
aaggcgagcgagttggtggagggcctgcgcctgcgcatgaagcgggcgtcccaggacctc
aagttcgaggaggccgcgcgggtgcgcgaccagttgcaggccattgaacgaagcctggaa
cggcagaaggtggccaccacggacttcaaggaccaggacgtcttcgcgctgcaccgcgag
ggcgaccgcatcctgttctacgtgttgtgggtgcggcagggccgcctcaacggcggacag
gcgttccccttcggcagccaggagttccccaacgaggagctgctcgcctccttcgtgaac
ctctactacgaccagggcagcttcgtgccggaggacgtgctgctgcccctggagccggag
gacggcacggagggcctggaggccctgctctccgagcgcaagggcgaccgcgtgcgcgtg
ctcgtgcccaagcggggggagaagcacgagctggtgaagatggcggagaagaacgccgag
caggccttcctggagcgccgccgcacgaaggacgaaacggaccaggtgctctcgcgcctc
cagcagcggctgggcctgcgcaacttcccgcgtcgcatggagtgcttcgacatctcccac
ttccagggctcggccatcgtcgcctcccaggtggccgtcacggatggcgacgcggacaag
tcccgttaccggaagtacaagatcaagacgctggagaagcaggacgacttcgccagcatg
tacgaagtcgtgacgcgccgcctcaagcgagggttggaggacggcgacctgccggacctg
ctcgtcatcgacggtggcaagggccagctcgccagcgcccacgcggccatgaaggacctg
ggcgtggagacggtggacgtggtgggcctggccaagagccgggacctggaagtgtttgat
cgcgacgcggagagcgctcgcagtccggagcgtgtgttcgtcgtggggcgaaaggacccc
atcgtcctggcgcagaactcagcggagatgttcatgctgacgcgcatgagggacgaggcc
caccgcttcgccatcacttttcagaagcaggtgctgcgcaagagtcgggtacgctcggcg
ctggaggacattccgggggtgggggaggtgcggcgcaagacgctcttgcggcacttcggt
tcgctcaagcgcgtgaacgacgccagcatcgaggagctcgcggaagtcgtgggccctgcg
atggcggagcgcgtccatgcggggcttcatggacacctcgatgaggaggacgaagacccc
atccgagaagcctccctggatgatgcgcaagaaccggcgaacgaaaaatcgcggggaggg
tcgccgcccggagcggcgtga
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