Metallosphaera sedula DSM 5348: Msed_0749
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Entry
Msed_0749 CDS
T00509
Name
(GenBank) peptide chain release factor subunit 1 (aeRF-1)
KO
K03265
peptide chain release factor subunit 1
Organism
mse
Metallosphaera sedula DSM 5348
Pathway
mse03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mse00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Msed_0749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mse03019
]
Msed_0749
03012 Translation factors [BR:
mse03012
]
Msed_0749
Messenger RNA biogenesis [BR:
mse03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Msed_0749
Translation factors [BR:
mse03012
]
Eukaryotic type
Release factors
Msed_0749
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ABP94924
UniProt:
A4YES2
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All DBs
Position
681823..682839
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AA seq
338 aa
AA seq
DB search
MLSLYIPPGRPVADVVNMLRQEASISQNIKLKRTRDAVESAITTAIDRLVSINKIPENGL
VLFCGENFDTGGFKCYMFSPPEKVTVYFYRTDKQFHTEFLEDMVEVSEVYGLLIVERDQG
TIGVLRGSRIEVLEEMEGYVPGKHMMGGQSQRRIDRIIEELYHDFLKSFGEKVNNYLLPY
LESGKLKGILLGGPGYAKKDFYDSDYIDYRLKKLILLPLIDIGYQGEAGLREMVMKSKDV
LKNQKYIEVEDLIEELKYHLAKDDGLVVYGKEEINKALQMGAIDKLIIFDDGTEENEKMV
QEAEKYGTKVYLVGDEIPEAEWVRKTFSGMVGKLRFRI
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttgctctccctatacatcccgccaggtagacctgtagctgatgtagttaacatgttgagg
caagaggcatcaatctcacaaaacatcaagttaaagaggacaagggatgccgtggaatct
gcgataacaaccgcaatagataggctcgtgagcattaacaagatccccgaaaatggttta
gtgcttttctgcggggagaacttcgacacaggggggttcaagtgctacatgttctctcct
ccagagaaggtcacagtctacttctaccgaacagacaagcagttccacacggagttcctc
gaggatatggtagaagtatcggaggtatacggcctactgatcgtggagagggatcaggga
accataggagtcttaaggggttcaaggattgaggttctagaggagatggaaggttatgtt
ccaggaaaacatatgatgggtggacaaagccaaagaagaattgacaggattattgaggag
ctctatcatgatttcttgaagagctttggcgaaaaggtaaacaactatctcctgccctat
ctcgaaagcggtaaattaaagggaattctcctgggaggtccaggatacgcgaagaaggac
ttctacgactctgactacattgactacagattgaagaaactgatcttgctccccttgatc
gatatcggataccaaggagaggcagggcttagggaaatggtaatgaagtctaaggacgtt
cttaagaaccagaaatacatagaggtggaggacctaatagaggaattgaagtatcatcta
gccaaggatgatgggctagtggtttatgggaaggaggaaataaacaaggccttgcagatg
ggtgccatagacaagttaattatatttgatgacgggaccgaggagaacgagaaaatggtt
caggaagccgagaagtacggaactaaggtttacctagtaggagatgagatacctgaggct
gagtgggtaaggaaaaccttcagtggcatggtggggaagcttaggtttaggatctga
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