Metabacillus sediminilitoris: GMB29_18290
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Entry
GMB29_18290 CDS
T07731
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
msem
Metabacillus sediminilitoris
Pathway
msem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GMB29_18290 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msem03019
]
GMB29_18290 (recQ)
03400 DNA repair and recombination proteins [BR:
msem03400
]
GMB29_18290 (recQ)
Enzymes [BR:
msem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GMB29_18290 (recQ)
Messenger RNA biogenesis [BR:
msem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GMB29_18290 (recQ)
DNA repair and recombination proteins [BR:
msem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GMB29_18290 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QGQ47021
LinkDB
All DBs
Position
complement(3818994..3821132)
Genome browser
AA seq
712 aa
AA seq
DB search
MIQLAENKLNEYFGYSSFRKGQEEIIDNVLNGNDTLAIMPTGGGKSICYQIPALLMDGIT
IVISPLISLMKDQVDALTSVGISSTYINSSLSATELNERLTAVRAGVYKIIYIAPERLDS
QVFHSFLLSMNVSMVAVDEAHCISQWGHDFRPSYRRIKELIYEFEQKPLVMALTATATRE
VTSDICQLLNISELNTFVTGFARENLTFNVIKGENKRDYITKYIKANPDQAGIIYASTRK
EVDELYQYLKKSGLKVGKYHAGLSEQERSDQQDQFLFDRLDVMVATNAFGMGINKSNVRY
VIHHNLPKNIEAYYQEAGRAGRDGEKSECIILFAGHDIQLQKFLIEQTTLSHDKKMHEYQ
KLQQMVDLCHTEKCIQSYIVEYFGENSPDSDCGKCINCRDTRSKIDVTTDALMVFSCIKR
MNERFGKTLVAQVLKGSKNKRITQMGFEKLSTYSLMKHKTEKQIVDFIDFLIAEGYLSLT
NAQYPVLELSNKARQVIVEKQQIYKKEQMIIQAIEANDTLFEKLKQVRRDLASKLAVPPY
IIFSDSSLKDMSSKCPINEDEFLEVKGVAKAKLEKYGNDFLAVICEFMKVERKTPINSEA
NPTLQKVVSNKTASYLTTYECYQEGTSIKDICINRGLSEITVQNHLIRAASEGYPIQWSQ
IISDEEEALIIEKVYELGTEMLKPIKEALPDHINYFQIKATICKLQLESVKH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgatacaactggctgagaataaattgaatgaatattttggctactcttcttttagaaaa
ggccaagaagaaataatagacaacgtattaaatggaaatgatactttagcaattatgcct
acaggtggagggaaatccatatgctatcagattccagcattactaatggatggcatcaca
atcgttatttctccacttatctcattaatgaaggatcaagtagatgcgctaacgagtgtt
ggtatctcatctacctatattaatagcagtctttctgcgactgaattaaatgaacgattg
actgcagtaagagcaggtgtttataaaattatttatattgctccagagcgtcttgattct
caagttttccactcgtttcttttatcgatgaatgtatcgatggtcgcggttgatgaagcg
cattgtatttctcaatggggacatgattttcgaccaagctatcgtaggataaaagagttg
atttatgaatttgagcaaaagccacttgttatggcattaacggctactgcaacaagggaa
gttacttcagatatttgtcagctattaaatatctctgaattaaatacttttgtaactggg
tttgctcgcgagaatttaacgtttaatgtaataaaaggtgaaaataaacgagattatata
acgaaatatattaaagcaaatcccgatcaggctggtattatctatgcttctacacgaaag
gaagttgatgagctatatcaatacttaaaaaagagcggcttaaaagttgggaaatatcat
gctggtttatcagaacaggaacgatcagatcagcaggatcagtttctttttgatagacta
gatgtcatggttgcaacaaatgcatttggaatgggaataaataagtctaatgtgcgatat
gttattcatcacaacctccctaaaaatattgaggcttactatcaggaagctggtcgagct
ggtcgtgatggtgaaaaaagtgaatgtataatattgtttgcaggtcatgatattcagctt
caaaagtttttaattgaacaaacaacattaagtcatgataaaaaaatgcacgaatatcaa
aagctccaacagatggtggatctctgtcatactgaaaaatgtattcaatcatatattgta
gaatattttggagaaaattccccagattcggattgcgggaaatgtattaattgtcgggat
acacgttcaaaaattgatgttacaacagatgctttaatggttttttcttgtatcaaaaga
atgaatgaaagatttggtaaaacacttgttgcacaagtattaaaaggctcaaaaaacaaa
cgtataacacaaatgggatttgaaaagctttcaacatatagcttaatgaagcataaaacg
gagaaacaaattgttgattttattgattttctaattgctgaaggttacttatccttaaca
aatgctcaatatcctgttctagagcttagtaataaagctaggcaagtaattgttgagaaa
cagcagatctataagaaagaacaaatgataattcaggcaattgaggcaaatgatacttta
tttgaaaaacttaagcaggtgagaagagatttagcctcaaagctagcagtgccgccctat
attatattttcagatagtagtttaaaagatatgagcagtaaatgcccaataaatgaagat
gaatttttagaagtaaagggtgttgcaaaggcgaagctcgaaaaatatggtaatgacttt
cttgcagtcatttgtgagtttatgaaggtggaaagaaaaacacctataaacagtgaagct
aatccaactttacaaaaagttgtttcaaataaaaccgctagctatctcactacctatgaa
tgctatcaggaaggaacttcaattaaagatatttgtataaataggggtttatcagaaatt
accgtacaaaaccatcttattcgtgctgcaagtgaaggctatccaatccaatggtcacaa
atcatttcagatgaagaagaggcgcttatcattgaaaaagtttatgagcttggaacggaa
atgttaaaaccaattaaagaagcacttccagatcatattaattattttcaaatcaaggca
acaatttgtaaattacaactagagtctgttaaacattaa
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