Mergibacter septicus: CEP49_02415
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Entry
CEP49_02415 CDS
T08622
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
msep
Mergibacter septicus
Pathway
msep02024
Quorum sensing
msep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CEP49_02415
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CEP49_02415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msep03019
]
CEP49_02415
03036 Chromosome and associated proteins [BR:
msep03036
]
CEP49_02415
Messenger RNA biogenesis [BR:
msep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CEP49_02415
Chromosome and associated proteins [BR:
msep03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CEP49_02415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AWX13484
LinkDB
All DBs
Position
complement(539042..539317)
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AA seq
91 aa
AA seq
DB search
MAKGQSLQDPYLNSLRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARSISPHQNHTGSKSVSGEIGLEEEKE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaggacaatctctacaagatccttatttaaattcactccgtcgtgagcgtatt
cctgtttcaatttatttggttaacggaattaaattacaaggtcaaattgagtcgttcgat
caattcgttattttattaaaaaataccgtcagtcaaatggtttacaaacatgctatttca
actgttgtaccagcacgttcaatttctcctcaccaaaatcatacaggttctaaatctgta
tctggtgaaataggtcttgaagaagaaaaagaataa
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