KEGG   Mergibacter septicus: CEP49_02415
Entry
CEP49_02415       CDS       T08622                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
msep  Mergibacter septicus
Pathway
msep02024  Quorum sensing
msep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CEP49_02415
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CEP49_02415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msep03019]
    CEP49_02415
   03036 Chromosome and associated proteins [BR:msep03036]
    CEP49_02415
Messenger RNA biogenesis [BR:msep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CEP49_02415
Chromosome and associated proteins [BR:msep03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CEP49_02415
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AWX13484
LinkDB
Position
complement(539042..539317)
AA seq 91 aa
MAKGQSLQDPYLNSLRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARSISPHQNHTGSKSVSGEIGLEEEKE
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcaaaaggacaatctctacaagatccttatttaaattcactccgtcgtgagcgtatt
cctgtttcaatttatttggttaacggaattaaattacaaggtcaaattgagtcgttcgat
caattcgttattttattaaaaaataccgtcagtcaaatggtttacaaacatgctatttca
actgttgtaccagcacgttcaatttctcctcaccaaaatcatacaggttctaaatctgta
tctggtgaaataggtcttgaagaagaaaaagaataa

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