Manduca sexta (tobacco hornworm): 115440068
Help
Entry
115440068 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein para
KO
K04834
voltage-gated sodium channel type II alpha
Organism
msex
Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
msex04040
]
115440068
Ion channels [BR:
msex04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115440068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
PFF1_TM
Zip
PepSY_TM
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
115440068
NCBI-ProteinID:
XP_037292327
LinkDB
All DBs
Position
8:8534945..8617792
Genome browser
AA seq
2102 aa
AA seq
DB search
MSEDLDSISEEERSLFRPFTRESLAAIEARIAEEHAKQKELEKKRAEGENDLGRTKKKKE
VRYDDEDEDEGPQPDATLEQGLPLPVRMQGSFPLELASTPLEDIDPFYHNQTTFVVISKG
KDIFRFSATNALWILDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMIMPTTPTVEST
EVIFTGIYTFESAVKVMARGFILQPFTYLRDAWNWLDFVVIALAYVTMGIDLGNLAALRT
FRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFALMGLQIYMGVLTQKC
IKTFPEDGSWGNLTDENWERFCQNETNWYGDGGEYPLCGNSSGAGQCEPGYVCLQGYGPN
PNYGYTSFDTFGWAFLSAFRLMTQDYWENLYQLVLRSAGSWHVLFFVVIIFLGSFYLVNL
ILAIVAMSYDELQKKAEEEEQAEEEALREAEQKAAARADKQEAREAHAREQAAAAEAAAY
AEAHPAKSPSFSSQSYELFVNQERGNQDDNTRERMSLRSDPFQDSVSTQPTHKPTATESH
NDSARRPRKVSMASLSLPGSPFNLRRGSRGSHQMALRPNGRARYPPGADRKPLVLSTYLD
AQEHLPYADDSNAVTPMSEENGAIIIPVYYANLGSRHSSYTSHQSRLSYTSHGDLLGGGK
AQTKEARLRGRSASRNHSVTSQPHPYPLPRGDSSLASRPLREYELSTTECTDEAGKVLKP
SNDNPFIENSQQPNVVDMRDVMVLNEIIEQAGRQSRASDQNVSVYYFPTAEDDEDGPTFK
ERLLECVMKGIDFFCVWDCCWLWLEFQKYVALLVFDPFVELFITLCIVVNTLFMALDHHD
MDRDMEKALKSGNYFFTATFGIEAMLKLIAMSPKYYFQEGWNIFDFIIVALSLLELGLEG
VQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQL
FGKNYVDYVDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMLVGDVSCIPFFL
ATVVIGNLVVLNLFLALLLSNFGSSSLSTPTADQDTNKIAEAFNRISRFIDWIKRNVADF
MKILKNKLTNQIAIHAPERVDNELELGTDLDDAVLYKDKKLKDQVEVAIGDGMEFTIPGD
NKYKKGKILMNNINAITGNHRDNRLDSELNHHGYPIQDDDTISQKSYGSHKIRSFKDESH
KGSADTIDGEEKKDASKEELGLEEEMIEEEEDKGDGLGKIDKKVDADEDVVDDTPADCCP
EQCYQRFPFLAGDDDSPFWQGWGTLRLKTFKLIENTYFETAVITMILLSSLALALEDVHL
PHRPILQDILYYMDRIFTVIFFIEMLIKWLALGFQKYFTNAWCWLDFIIVMVSLINFVAA
LCGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFA
IMGVQLFAGKYFKCVDMNHTTLSHEIIPDRNACILENYTWENSPMNFDHVGKAYLCLFQV
ATFKGWIQIMNDAIDSREVGRQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNE
QKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPKWRPQAIVFEIVTDKKFDMII
MLFIGLNMLTMTLDHYQQSDTFSAVLDYLNMIFIVIFSSECLLKIFALRYHYFVEPWNLF
DFVVVMFSILSLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSL
PALFNICLLLFLVMFIFAIFGMSFFMHVKNKGGLDDVYNFKTFVQSMILLFQMSTSAGWD
GVLDGIINEEECDLPDNERGSPGNCGSATIGITYLLSYLVISFLIVINMYIAVILENYSQ
ATEDVQEGLTDDDYDMYYEIWQRFDPDGSQYIRYDQLSDFLDVLEPPLQIHKPNKYKIIS
MDIPICRGDMMFCVDILDALTKDFFARKGNPIEETGDLEVGRPDEAGYEPVSSTLWRQRE
EYCARLIQHAWRRHRRAHEEPGAGDGEGGEAGGAEGAGAATAVLLDAVTPNGHRVVLQGG
GAAPRPPEPAPPPXARLTRAGARAAARAGRRRAAAAARTAARALEPTQAHLIIFYARRFA
CT
NT seq
6309 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggacttggactcgatcagcgaggaagaacgaagcttgttccgaccctttaca
cgagagtcattggccgctatcgaagcccgcatagctgaggaacatgccaagcaaaaggaa
ctcgagaaaaaacgagcggaaggcgagaacgatttggggcggacgaaaaagaaaaaagaa
gtgcggtacgatgacgaagacgaggacgagggccctcagccggacgcgactctcgagcag
ggtctcccgctgccggtccgaatgcaaggctccttcccgctggagctcgcctccacgccc
ctcgaggacatagaccctttctatcataaccagacaaccttcgtagttataagcaagggt
aaagatatcttcagattttcggcgaccaatgccctatggatactagaccctttcaatccc
ataagaagagtggcgatatatattctagtacatcctttgttctcattgtttattattact
acgatattagtgaattgcattcttatgataatgcctacaacgccaactgtcgaaagtact
gaagttatctttaccgggatctacacgtttgaatcagcggtgaaagtaatggccaggggt
ttcatactacagccattcacataccttagagatgcatggaattggcttgacttcgtagtt
atagctttagcttatgtgacgatgggcatagatctcggcaacttggccgcgcttagaaca
ttcagagtactccgagcgttgaagactgtggccatcgtaccgggtttgaagaccatcgtc
ggtgccgtaatagaatcagtaaaaaatctacgcgatgtgataattctaacgatgttttcg
ctctctgtgttcgcgctaatgggcctacaaatctacatgggagtattgacgcagaaatgt
atcaaaacattccctgaagatggctcctggggtaacctcaccgatgagaactgggagagg
ttctgccagaacgaaacgaactggtatggggatggaggggaatatccactttgtggaaat
tcatcaggagcagggcagtgtgaaccaggctacgtttgtcttcagggatacggtccgaac
cctaactacggatacacaagtttcgatacattcggttgggcattcctttcagctttccgg
ttgatgacgcaggattactgggagaatctttatcaattggtgctcaggtcagcagggtca
tggcacgtcttgttcttcgtagtgataatctttttaggatcattctaccttgtgaacttg
attttggccatcgtcgccatgtcatacgatgagttgcaaaagaaagccgaagaggaggaa
caagccgaagaggaagctctcagggaagcagaacaaaaagcagcagcaagagcggacaaa
caagaggcgcgggaagcacacgccagagaacaggcggcagcagcggaggcggcggcgtac
gccgaggctcacccggccaagtcacccagcttctcctcacagagctacgagttgttcgtg
aatcaggaacgaggcaaccaggacgacaatacgcgggagcgcatgtccctccgtagcgac
cccttccaggactcggtgagcacacagcccacgcacaagcccaccgcaactgaatcgcac
aacgactccgcacgacggcccaggaaggtcagcatggcgtcattgtcgttgcctggttcg
ccgttcaatttacgacgtggctcgcgaggttctcaccagatggcattaaggccgaatggg
agggcacgttacccaccgggagctgatcggaaacccttggtgctgtccacatacttagat
gcgcaagaacacctgccctatgccgatgactctaatgcagtcacaccgatgtctgaagaa
aatggtgctatcatcattcctgtatattatgcaaatttaggatcgcgccactcatcatat
acgtcccatcagtctcgtctctcctacacctctcacggtgacttgctaggtggtggtaaa
gcgcaaaccaaagaagccaggttacgaggccggtcagcttcgagaaaccacagcgtcacg
tcacagcctcacccatatccgctaccaagaggagattcctcattagcgtctcgacctctt
agggaatatgaactgagtacaactgaatgtacagatgaagcaggaaaggttttaaaacca
tcaaacgacaacccttttatagaaaattctcaacagcctaacgtagtcgacatgcgagat
gtaatggtgttaaacgagatcatcgaacaagctgggcgacaaagtcgagcgagcgaccaa
aatgtgtcagtgtactacttcccaacagcggaagatgatgaggacgggccgacgttcaag
gagagactactcgagtgcgtcatgaaaggcatagacttcttctgtgtgtgggactgctgt
tggttgtggttggagttccaaaagtacgttgcattgttggtattcgatccgttcgtggaa
ttgtttatcacgctgtgtatcgtcgtgaacactttgttcatggccttggaccaccacgat
atggatagagacatggaaaaggcgctcaagagtggcaattattttttcaccgcaacattc
ggtattgaagccatgcttaagttaatagctatgagtccaaaatattactttcaagaagga
tggaacatttttgactttataatcgtggccttatcgcttttggagttaggtctggaaggt
gtacagggtttgtcagtgttgcgttcctttcgattgcttcgagtattcaaattggcaaag
tcatggccgacacttaatttactcatctctataatgggtaggactatgggtgccttgggc
aacctgaccttcgtattgtgcatcattattttcatatttgcggtgatgggtatgcaacta
ttcggaaaaaattacgtggattacgtcgatcggtttccggacggagatcttccaagatgg
aattttacggacttcatgcacagtttcatgatagtgttcagagtactctgtggagaatgg
attgagagtatgtgggattgcatgttggtcggagacgtctcctgtataccgttcttcttg
gctaccgtcgtcattggcaatcttgtggtactgaatctcttcttggccctgttgctctcg
aacttcggttcgtcaagtttgtcaacgcccaccgccgatcaggatacgaataaaatagct
gaggccttcaatcggatatcaaggttcatagattggataaaacggaacgtcgccgatttc
atgaagatactaaaaaataaactgaccaaccaaatagcgatacacgcacccgaacgggtt
gacaacgagttggaacttggaactgatctagatgacgccgtactttacaaagacaagaaa
ctgaaagaccaagtagaagtagctataggtgacggtatggaattcacgataccaggtgac
aataaatacaagaaaggaaaaatattaatgaataatataaacgcaataactggcaatcac
agagataatcggttagacagtgaacttaatcatcatggatacccgatacaggatgacgac
acaatcagtcaaaaatcgtatggtagtcacaaaataagatcatttaaagacgaaagccat
aaaggatcagcagatacgatagacggagaagagaaaaaagacgccagtaaagaagaatta
ggattagaagaagaaatgatagaagaagaagaagataaaggcgacgggcttggaaaaatt
gataaaaaagtagacgctgacgaagacgtagttgacgatacacctgctgattgctgtccc
gaacagtgctaccaacggtttccttttcttgctggagatgacgattcgccattctggcaa
ggatggggcactcttcgactaaagacattcaaacttatcgaaaacacttattttgaaacg
gctgtgattacaatgattttgctgagtagtttagctttggctttagaagatgtacattta
ccacatcgtcctattcttcaagacattctgtattatatggatcgtattttcaccgtcatc
tttttcattgagatgttgatcaagtggcttgcccttggcttccagaaatacttcacaaac
gcatggtgctggctcgatttcatcattgtcatggtctcgcttataaacttcgtagcggcg
ctttgtggcgccggcggcattcaggcgttcaaaacgatgcgaacgctgcgcgctctgcgt
ccgctcagagccatgagtcgcatgcagggcatgagggtggtggtaaacgcgctggtgcaa
gccattccatctatcttcaacgtgttgctcgtgtgtctcatcttttggcttatattcgct
ataatgggagtccaacttttcgctggaaagtacttcaagtgcgtcgacatgaaccacacc
acactaagccatgaaatcataccagatagaaatgcttgtatattggaaaattacacatgg
gaaaattcaccgatgaactttgatcacgttggcaaagcgtatttatgcctctttcaagtg
gctactttcaaaggctggattcagattatgaacgacgccattgattcaagagaagtggga
cgacaacctatacgagagactaacatctatatgtatctatatttcgtattcttcattatt
ttcggatcatttttcaccctcaatctattcatcggtgtgattatcgataacttcaacgaa
caaaagaaaaaagccggtggcagtcttgagatgttcatgactgaagaccaaaagaaatac
tataacgccatgaagaagatgggatccaagaagcctctgaaagccatcccaagaccaaaa
tggcggccacaagctatagtattcgaaatagtgacagacaagaaattcgacatgatcatt
atgttgttcatcggcctgaacatgcttaccatgacattggaccactaccagcaatcagac
acgtttagtgcagttcttgactatctcaacatgatattcatcgtaatatttagttcagag
tgcctactgaaaatatttgccttacggtatcattactttgttgagccgtggaatctgttc
gatttcgtcgtagtaatgttttctattcttagcttggtgctgagtgatattatagagaaa
tattttgtatcaccaactcttttgagagtagtgagagtagctaaagtcggtcgagtactt
cgactcgttaaaggtgcgaagggtatccgaacactattattcgcgttagccatgtcactg
ccagctttgttcaatatatgtttactcctgttcctggttatgtttatcttcgccatattc
ggcatgtcttttttcatgcacgtaaagaataagggaggactcgacgatgtttacaacttc
aagaccttcgtgcagagtatgattctgctctttcagatgtctacatctgccggttgggat
ggtgtgttagacggaattataaatgaagaagaatgtgacttgccagataatgaacgaggt
tcgccaggcaactgtggttctgctaccatcggcatcacttacttgctgtcctacctcgtc
atatccttcctcatcgttatcaacatgtacattgctgtcattctcgagaattattctcag
gctacagaagatgtgcaagaaggtttgacggacgatgactacgatatgtattacgaaatc
tggcaacgtttcgatccggatggtagccaatacattcgctacgaccagttatcggatttc
ctcgacgtgctcgagcctccgttacaaatacacaaaccgaacaagtacaaaattatatcg
atggacattcctatatgtcggggcgacatgatgttctgcgtagacatcctggatgcccta
acaaaggactttttcgcccgaaagggcaacccaatcgaagagacgggcgacttggaagtg
ggacggccggacgaagccggctacgaacctgtgtcgtccacactgtggaggcaacgcgag
gagtactgcgcacggctgattcagcatgcgtggcggcggcatcggcgggcacacgaagag
cccggcgcgggcgatggcgagggcggcgaggcgggcggcgcggagggcgcgggcgccgcg
acggccgtgctgctggacgcggtgacgcccaacgggcaccgcgtggtgctgcagggcggc
ggcgcggcgccgcgcccgcctgagcccgcgccgccgcccngcgcccgtctgacccgcgct
ggcgctcgcgctgctgcccgcgctggtcgacgacgcgccgctgccgctgcccgcaccgct
gcccgagctcttgagcccacccaagcgcacttaattattttttacgctagacgtttcgcg
tgtacataa
DBGET
integrated database retrieval system
