Manduca sexta (tobacco hornworm): 115442228
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Entry
115442228 CDS
T07401
Name
(RefSeq) protein crooked neck
KO
K12869
crooked neck
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115442228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msex03041
]
115442228
03036 Chromosome and associated proteins [BR:
msex03036
]
115442228
Spliceosome [BR:
msex03041
]
Complex B
Other components
Prp19-related factors
115442228
Complex C
115442228
Chromosome and associated proteins [BR:
msex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115442228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
ARM_TT21_5th
BSD
Motif
Other DBs
NCBI-GeneID:
115442228
NCBI-ProteinID:
XP_030023095
LinkDB
All DBs
Position
11:complement(4472854..4475989)
Genome browser
AA seq
707 aa
AA seq
DB search
METKTTKMPKVAKVKNKAPAEIQITAEQLLREAKERDLEILPPPPKQKISDPEELRDYQH
RKRKAFEDNIRKNRMVIGNWLKYAQWEESQKQVQRARSIYERALDVDHRNVTLWLKYTEM
EMRNRQVNHARNLWDRAVTILPRVSQFWYKYTYMEEMLENVAGARQVFERWMEWQPDEQA
WQTYINFELRYKELERARQIYERFVMVHPDVKNWIKYARFEENHGFINGARKVYERAVEF
FGDEDLDERLFIAFAKFEENQKEHDRARVIYKYALDHISKDKNKELYKAYTIHEKKYGDR
SGIEDVIVNKRKYMYEQEVIENPTNYDAWFDYIRLVENEGNVDDIRDTYERAIANVPPSK
DKQFWRRYIYLWINYALYEELEVEDIERTRQVYRTCLELIPHKIFTFSKIWLMYAQFEVR
CKDLKQARKTLGMALGICPRDKLYRGYIDLEIQLREFDRCRILYQKFLEYGPENCVTWIK
FAELETLLGDTDRARAIYEIAVNQSRLDMPELLWKSYIDFEVSQGETEKARQLYERLLER
TVHVKVWLSYAKFELNAENEDNINVDLARRVYERANDSLRSAGEKEARVLLLEAWKEFEN
EIGDEIKLEKVLAKMPRRVKKRQKIISEGGVEEGWEEVFDYIFPEDEMVKPNLKLLAAAK
QWRKQKQATQSPQEENQEHNEEHETQTPQNHEDSSSSEDGNEENEKQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaaacaacaaaaatgcctaaagtagctaaggtgaaaaacaaagcaccagca
gaaatccaaattactgctgagcaattgcttcgggaagcgaaagaaagagatttggaaata
ttaccgccgccgccaaaacagaagatctcagatccggaagagctaagagattatcaacac
cgcaagagaaaggcttttgaggataatattcgaaaaaatcgtatggtaataggtaactgg
cttaaatatgctcagtgggaagaatcacagaagcaagttcagagggctcgttcaatttat
gaaagagcattggatgtggaccatagaaatgttaccctttggttgaaatatactgaaatg
gaaatgcgaaatagacaagtcaatcatgccagaaacttatgggacagggctgtcacaatt
ttaccaagggtgtcccaattttggtataagtacacatacatggaagaaatgttggaaaat
gtagcaggggcaagacaggtatttgaacgttggatggaatggcaaccagatgaacaagca
tggcaaacatatatcaactttgaattaaggtacaaagaattagaaagagctcgtcaaata
tatgaaaggtttgtcatggttcacccagatgttaaaaactggataaaatatgcaagattt
gaagagaaccatggctttataaatggagcaagaaaagtatatgaaagagcagtggagttc
tttggtgatgaagatcttgatgagagactgtttattgcctttgcaaagtttgaagaaaat
caaaaggagcatgacagggcaagggtgatttacaaatatgctctagaccatatatcaaaa
gataaaaataaagaactttataaagcatacaccattcatgaaaagaaatatggtgaccga
tctggtatagaagatgttattgttaacaagaggaaatacatgtatgaacaagaagttata
gaaaatcccacaaactatgatgcttggtttgattatataagacttgtagaaaatgaagga
aatgtagatgacatacgagacacatatgagagagctatagccaatgtgcctccatcaaaa
gataagcaattctggagaaggtacatttatttatggatcaattatgcattatatgaggaa
ttagaagtagaagacatagaacgcaccagacaagtatacaggacatgtctagaactgatt
ccacacaaaatatttacattctctaaaatatggctgatgtatgcccaatttgaagtcaga
tgcaaagatttgaaacaagcaagaaagactttgggaatggcgttaggcatatgtcctaga
gataagctttacaggggttacattgacttagaaatacaactaagggaatttgataggtgc
agaatactgtatcagaaatttttagagtatggacctgaaaactgcgttacatggatcaag
tttgcagaattggaaacactacttggtgatactgatagagccagagctatttatgaaatt
gctgtaaatcaatctagattggatatgcctgagcttttatggaaaagctacatcgacttt
gaagtatcacagggagaaacagaaaaagctagacaactttatgaaagacttttagaaaga
acagtgcatgttaaagtatggttgtcatatgcaaaatttgagctcaatgctgaaaatgag
gacaatattaatgtagatcttgcaaggcgtgtttacgaaagagccaatgacagtcttaga
agtgctggtgaaaaagaagcaagggttcttctcttggaagcatggaaagaatttgaaaat
gagataggtgatgaaataaaactagaaaaggtcttggccaaaatgcctaggagagttaaa
aagagacaaaagatcattagtgaggggggtgttgaggaaggttgggaagaagtgtttgac
tacatattccctgaagatgagatggttaaacccaatcttaaattgctggcagctgctaag
caatggcgtaaacaaaaacaggcaacacaaagccctcaagaagaaaatcaagagcataat
gaagaacatgaaacacaaactcctcagaatcatgaagacagttctagcagtgaggatggc
aatgaggaaaatgaaaaacaatag
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