Manduca sexta (tobacco hornworm): 115449623
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Entry
115449623 CDS
T07401
Name
(RefSeq) LOW QUALITY PROTEIN: protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
msex
Manduca sexta (tobacco hornworm)
Pathway
msex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115449623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msex03019
]
115449623
Enzymes [BR:
msex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
115449623
Messenger RNA biogenesis [BR:
msex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
115449623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
CbiA
AAA_16
ATP_bind_1
RsgA_GTPase
AAA_21
Motif
Other DBs
NCBI-GeneID:
115449623
NCBI-ProteinID:
XP_030033350
LinkDB
All DBs
Position
13:complement(6033473..6038497)
Genome browser
AA seq
420 aa
AA seq
DB search
MTEVQLQEFKLDPDSELRFELRAKNEKVVLEVKSGYAEVFGTELVKGKPYEFHXGAKVAV
FTWHGCIIELRGRTEVSYVAKETPMVVYLNVHAALEQQRLAAEQENSRGPVTMVVGPGDV
GKSTLTRLLLNYAVRMGRRPNFVDLDVGQGQISVPGTIGAVLVERPASIEEGFSQQAPLV
YHFGHVSPGDNLELYNTIVSRLAEVITERCENNKKASASGVIINTCGWIKNAGYKVLTHA
AQAFEVDVILVLDNERLYNELKRDMPKFVKVVYLPKSGGVVERSSTQRAEARDARIREYF
YGKRTPYYPHSFDVKFSDLKIYKVGAPSLPDSCMPLGMRAEDALTKLVSVWPSPALHHRL
LAVSFAAAPDDHVLHSNLAGFVCVTAVDMERQMLTILSPQPRPLPNTVLLLSELQYMDNH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagttcaattacaagaatttaaattggaccctgattcagaactacgatttgag
ttgagggcgaaaaatgaaaaagttgtcttggaagtcaagagtggttatgcagaggtattt
ggcacagagcttgttaaaggtaaaccttatgagttccacnacggggcgaaggtggcggtg
tttacgtggcatggatgcattattgaactccgagggagaacagaagtcagctatgttgcc
aaagaaacacctatggttgtatacctcaatgttcatgcagcactagagcaacagcggtta
gcagctgaacaagagaattctcgaggtcccgtcaccatggttgtagggccaggggacgtg
ggcaagtccaccctgaccaggctactgctcaactatgcagtcaggatgggcagacggccc
aatttcgtggatttagatgtgggacagggacagatcagtgttcctgggactattggagca
gtattagtggaacgtccagcgtcaatagaggaggggttcagccagcaagcaccattagtg
taccactttgggcacgtctctcctggagacaacctggaattgtacaacacaatagtgtcg
aggttggcagaagtcatcactgagcgatgtgaaaataataaaaaagcgtcagcatcaggt
gtaataattaacacatgtggttggatcaagaatgcagggtacaaagttctcacacatgca
gctcaagcttttgaggtggacgtgatcctagtcttggacaatgagaggctgtacaatgaa
ctgaagagggatatgcccaagtttgtgaaggttgtttatttacccaaaagtggtggggtt
gtggaacgatcgtctactcagagggcggaggcgcgtgacgcgaggatcagggaatatttt
tacgggaagaggacgccttattatccgcactcgtttgacgtgaaattttcagacttaaaa
atatataaggtgggtgccccgtcgctgccggactcgtgcatgccgctgggcatgcgggcg
gaggacgcgctgaccaagctggtgtcggtgtggccctcgccggcgctgcatcaccgcctg
ctcgcagtgtcgttcgccgccgcgcctgacgaccacgtgctgcactcaaacctcgccggc
ttcgtctgtgtcacggctgtggacatggagcggcagatgctgacgatcctgtcgccgcag
ccgcggccgctgcccaacaccgtgctgctgctgtcggagctgcagtacatggacaaccac
tag
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integrated database retrieval system
