KEGG   Manduca sexta (tobacco hornworm): 115449707
Entry
115449707         CDS       T07401                                 
Name
(RefSeq) eukaryotic initiation factor 4A
  KO
K03257  translation initiation factor 4A
Organism
msex  Manduca sexta (tobacco hornworm)
Brite
KEGG Orthology (KO) [BR:msex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msex03019]
    115449707
   03012 Translation factors [BR:msex03012]
    115449707
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msex04147]
    115449707
Messenger RNA biogenesis [BR:msex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     115449707
   mRNA cycle factors
    Stress granule specific factors
     115449707
Translation factors [BR:msex03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    115449707
Exosome [BR:msex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115449707
  Exosomal proteins of bladder cancer cells
   115449707
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 Helicase_RecD AAA_30 Flavi_DEAD CMS1
Other DBs
NCBI-GeneID: 115449707
NCBI-ProteinID: XP_030033445
LinkDB
Position
23:6496900..6504235
AA seq 421 aa
MSYSSERRSEDWPEDSKNGPSKDQVSYDGPPGMEPGGALDTNWDQVVETFDDMNLKEELL
RGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSVRECQAL
ILAPTRELAQQIQKVVIALGDHLNAKCHACIGGTNVREDIRQLESGVHVVVGTPGRVYDM
ITRRALRASTIKLFVLDEADEMLSRGFKDQIHDVFKMLSPDVQVILLSATMPDDVLEVSR
CFMRDPVRILVQKEELTLEGIKQFYISIEQEEWKLETLCDLYDTLSIAQAVIFCNTRRKV
DWLTESMHQRDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVI
NYDLPTNRENYIHRIGRGGRFGRKGIAINFVTETDRRALKDIEDFYHTSISEMPSDVANL
I
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtcttattcatcagaaagaagatcagaagattggcctgaggattccaaaaacgggcca
tcaaaggatcaagtgagctatgacggtcctccaggcatggaacccggtggagccctggat
actaactgggatcaagtggtggagactttcgacgacatgaatttgaaggaagaattattg
agaggaatctatgcctatggtttcgagaaaccgtcggcaatccaacagcgtgctatcatg
ccgtgcatccagggacgcgacgttatagcccaagcccaatctggaaccggcaaaactgcg
actttctctatttccattctgcagcaaatagacaccagtgtccgcgaatgtcaggctctt
attctggccccgaccagagagctggcgcagcaaattcaaaaggtggtgatagctcttggt
gaccacttgaatgctaaatgccacgcttgcatcggtggcaccaatgtgcgcgaggatatt
cgccagctggagagtggagttcatgtggtcgtgggcactccgggccgcgtgtacgacatg
attacgcgccgggcgctgcgcgcgagcaccatcaagctctttgtccttgacgaggccgac
gaaatgttgtccagaggatttaaagatcaaattcacgatgtattcaagatgttgtcacct
gacgtgcaggttatcttactctctgctaccatgcctgatgatgtgttggaggtgtcccgt
tgtttcatgagagaccctgtgcgcattcttgtgcaaaaagaagagctaaccttggaaggt
attaaacaattctacatttctattgagcaagaggaatggaaattggagactctttgtgat
ttgtacgacaccttatccattgctcaggctgtgattttctgcaacactcgtcgcaaggtc
gactggctgaccgagtctatgcaccagcgcgacttcaccgtgtccgccatgcacggcgac
atggaccagcgcgagcgtgaagtgatcatgaggcagttccgtactggctcttcccgtgtt
ctcattaccactgatttgctggcgcgtggcattgacgtgcagcaagtgtcttgcgtcatc
aattatgatctgcccactaaccgtgaaaattacattcatagaattggtcgaggtggccgt
ttcggccgtaaaggaatcgctatcaactttgtgactgaaacagatagaagagcactcaag
gacattgaggacttctatcacacaagtatctcggaaatgcccagtgatgtggccaacctc
atctga

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