KEGG   Manduca sexta (tobacco hornworm): 119192983
Entry
119192983         CDS       T07401                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
msex  Manduca sexta (tobacco hornworm)
Pathway
msex03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:msex00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    119192983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msex03019]
    119192983
Messenger RNA biogenesis [BR:msex03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     119192983
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_VPS8 Beta-prop_DCAF4 eIF2A NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_NWD2_C RMC1_N PEP5_VPS11_N Beta-prop_WDR75_2nd Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_HPS5
Other DBs
NCBI-GeneID: 119192983
NCBI-ProteinID: XP_037302593
LinkDB
Position
Unknown
AA seq 371 aa
MWHIKFCFDRLLNLMMVGLQNEPDRKDRLAATSVAEHLLGTTGFDLEYEMDASSLAPEPA
TYETAYVTSHKMACRAGAFSSCGQLVATGSVDASIKILDVERMLAKSAPEEVDPGREQQG
HPVIRTLYDHTDEITALDFHPREQILVSASRTVASNCLTSQKASAKKAYKSITDAEPVLC
VAFHPLGDHIIASTTHPVIRLYDVTTSQCFVCPIPSHHHKKQVNSIKFSPNGKYFASGSA
DGSVKLWDTVSNRCFNTFINAHEGAEVCSVAFTRNSKYLLTSGLDSSIKLWELASSRCLI
QYTGAGTTGKQDHHAQAVFNHTEDYVMFPDEATTSLCTWHSRSASRCQLMSLGHNGAVRF
VELMISLLLIA
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgtggcatataaaattttgttttgacagattattgaatctgatgatggtgggtctccaa
aatgaacctgacagaaaagaccgcctggctgctacaagcgtggcggagcacctgcttggg
actactggttttgatcttgagtatgagatggacgcctcatcactagcgccggagccagca
acgtatgagactgcttatgtgacgtcacacaagatggcatgtcgcgccggcgcattcagt
tcctgcggacagcttgttgccactggcagtgtggacgctagtattaagatcttggacgtg
gagcgcatgttagctaagtcggcgcctgaggaggtggaccctggacgtgaacagcaagga
catccagttataaggacattgtacgatcatacagatgaaataactgctttggactttcac
ccacgcgagcagattctcgtgtcggcatcgcggactgttgcatcaaactgtttaacatca
cagaaggcttcagcgaaaaaggcttacaaatctattacagatgcagagccagtgctctgc
gtggcgttccatcccttgggcgaccacatcatagcttccaccactcacccagtgatccgg
ctgtatgacgtcaccaccagccaatgtttcgtatgtccaataccgtctcatcatcataag
aagcaagttaattccattaagttttccccgaatggcaagtacttcgcgagcggcagcgcg
gacgggtcggtgaagctgtgggacaccgtgtccaaccgctgctttaacactttcatcaac
gcgcacgagggggccgaggtctgctccgtcgcgttcaccaggaatagcaagtatcttcta
acatctggattggactcgtctataaaactgtgggagctggccagcagcagatgtctcata
caatacactggagcgggcaccactggcaagcaagaccaccacgcccaagcagtgttcaac
cacacggaagactacgtgatgttcccggacgaggcgaccacgtcgctgtgcacgtggcac
tcccgcagcgccagtcggtgccagctgatgtcactcggccacaacggtgccgtcaggttc
gtcgaattaatgatatcacttttattaatagcctaa

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