Entry |
|
Name |
(GenBank) DNA polymerase III, delta
|
KO |
|
Organism |
msg Mycolicibacterium smegmatis MC2 155
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:msg00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSMEI_4460
03430 Mismatch repair
MSMEI_4460
03440 Homologous recombination
MSMEI_4460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:msg03032]
MSMEI_4460
03400 DNA repair and recombination proteins [BR:msg03400]
MSMEI_4460
Enzymes [BR:msg01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSMEI_4460
DNA replication proteins [BR:msg03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSMEI_4460
DNA repair and recombination proteins [BR:msg03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSMEI_4460
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(4665267..4666220)
|
AA seq |
317 aa
MTDGLHLVLGDEELLVERAVGAILRDIRKRAGSDDVPVDRLRAGEVSTSELAELLSPSLF
AEERLVVLEAAAEAGKDAVALIASAAADLPPGTVLVVIHSGGGRAKALADQLKKLGAEVH
PCARITKPAERADFVRSEFRRLRAKVSEDTVSAVLDAVGSNIRELAAVCSQLVADTAGEV
DAAAVRRYHSGKAEVKGFDIADKAVVGDVAGAAEALRWAMLAGEPHVVLADALAEAVHTI
ARVGPLSGDPYRLAGELGMPPWRVQKAQKQSRRWSRESVAEAMKVVAALNADVKGVAADA
DYALEAAVRRVAQLAAG |
NT seq |
954 nt +upstreamnt +downstreamnt
gtgaccgacgggctgcacttggtgcttggcgacgaggaactgttggtggagcgcgccgtg
ggcgccatcctgcgcgacatccgcaagcgtgccggttccgacgacgtgccggtggaccgc
ctgcgcgcgggtgaggtgagcaccagtgagctcgccgaactgctcagcccgtcgctgttc
gccgaggagcgtctggtcgtgctcgaggccgccgccgaggcgggcaaggacgccgtcgcc
ctcatcgcgtcggcggctgccgatctgccgcccgggaccgtgctggtggtcatccactcc
gggggtggccgcgccaaggcgctggctgatcagctcaagaagctgggcgccgaggtccat
ccgtgcgcccgcatcaccaagccggccgagcgtgcggacttcgtccgctccgagttccgc
agactgcgcgccaaggtatccgaggacacggtctcggcagtgctcgacgcggtcggctcc
aacatccgcgaactggccgcggtgtgttcccaactggtcgccgacaccgcgggtgaggtc
gacgccgcggcggtgcgccgctatcacagcggaaaggccgaggtgaagggcttcgacatc
gccgacaaggcggtggtgggggatgtggccggggcggccgaggcgctgcgctgggcgatg
ctggcgggggagccgcacgtggtgctggccgatgcgctggccgaggccgtgcacacgatc
gcgcgggtcgggccgctgtcgggtgatccgtaccggctggccggtgagctgggaatgccg
ccgtggcgcgtgcagaaggcgcagaagcagtcgcggcgctggtcgcgggaatccgtcgcg
gaggccatgaaagtggtggcggcgctcaacgcagacgtgaagggcgtagccgctgacgcg
gactacgccctggaggcggcggtgcgccgggtggcgcagctcgctgccggttag |