Mycobacterium shigaense: MSG_03141
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Entry
MSG_03141 CDS
T05717
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
mshg
Mycobacterium shigaense
Pathway
mshg00860
Porphyrin metabolism
mshg01100
Metabolic pathways
mshg01240
Biosynthesis of cofactors
Module
mshg_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
mshg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
MSG_03141 (cobD)
Enzymes [BR:
mshg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
MSG_03141 (cobD)
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
TAtT
DUF2530
Motif
Other DBs
NCBI-ProteinID:
BAX93280
UniProt:
A0A1Z4EK39
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All DBs
Position
complement(3321232..3322170)
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AA seq
312 aa
AA seq
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MFVTRARTVGVLAGYLADLAVSDPRRGHPVAVFGHAVARLERVTYRDAELDGAVHVGIAV
GLVGLLGFVVQRAVARRGPLWSVAATAAATWVSLGGTTLARTGLDMAALLDRGDVEAARR
LLPSLCGRDPAQLDGGGLTRAALESIAENTSDAQVAPLLWAAAGGAPAALAYRAVNTLDS
MIGHRSPRYARFGWAAARLDDAANYVGARVTAMLVAACAPVVGGSPAQALRSWHRDAARH
PSPNAGVVEAAFAGALGVRLGGPTQYRHELQIRPTLGDGPQPIVADLRRAVALSRAVQLA
AAVVAAGLAGVR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgtgacgcgggcgcggaccgtcggtgtgctggccggctatttggccgacctcgcc
gtgagcgacccgcggcggggccatccggttgcggtgttcggccatgccgtcgcccggctg
gagcgggtcacctaccgcgacgccgaactcgacggcgcggtgcacgtgggtatcgcggtc
ggactggtaggtctgctcggatttgttgtgcagcgcgccgtcgcgcgccgcggcccgctg
tggtcggttgccgcgacggccgcggccacctgggtgtcgctgggcgggaccacgctggcg
cgcaccggcctggacatggccgcgctgctggaccgcggcgacgtcgaggccgcgcggcgg
ctgctgccgtcgctgtgcgggcgcgacccggctcagctcgacggcggcggcctgacgcgc
gcggcgctggagtcgatcgccgagaacacgtcggacgcccaggtggcgccgctgctgtgg
gcggcggccggtggggcgcccgcggcgttggcgtaccgcgccgtcaacacgctggattcg
atgatcggccaccgctcgccgcgctacgcccgattcggttgggccgcagcacgattggat
gacgcggccaattacgtcggcgcccgggtcaccgcgatgctggtggcggcgtgcgcgccg
gtggtcggcggttcgccggcgcaggcgctgcgcagctggcaccgcgacgcggcacggcat
cccagccccaacgccggcgttgtggaggcggccttcgcgggcgcgctgggcgtgcggctc
ggcggccccacgcagtatcgccacgagctgcagatccggcccaccctcggcgacggcccg
caaccgatcgtcgccgacctgcgtcgggcggtggcgctgtcgcgggcggtgcagttggcg
gccgcggtggtcgcggccgggctggccggtgtgcgttga
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