Mycobacterium shinjukuense: MSHI_11670
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Entry
MSHI_11670 CDS
T07415
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
mshj
Mycobacterium shinjukuense
Brite
KEGG Orthology (KO) [BR:
mshj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mshj03051
]
MSHI_11670 (pafA)
Enzymes [BR:
mshj01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
MSHI_11670 (pafA)
Proteasome [BR:
mshj03051
]
Prokaryotic proteasome
Bacterial regulatory particles
MSHI_11670 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
BBX73261
UniProt:
A0A7I7MLX3
LinkDB
All DBs
Position
1320574..1321917
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AA seq
447 aa
AA seq
DB search
MGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGSHPEYA
TAECDSLVQLVTHDRAGEWVLEELLIDAEQRLADEGIGGDIYLFKNNTDSAGNSYGCHEN
YLIVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVSSATTR
SRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGTAALVLEMIENGVAFRDFSL
DNPIRAIREVSHDVTGRRPVRLAGGRQASALDIQREYYSRAVEHLQTREPNAQIEQIVDL
WGRQLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYNMELSDPKIAQLDLAYHDIKRGRG
VFDLLQRKGLAARVTTDEEIADAVDNPPQTTRARLRGEFISAAQAAGRDFTVDWVHLKLN
DQAQRTVLCKDPFRAVDERVKRLIASM
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcgagaccgagttcggtgtcacctgcacgttccacggtcaccgccggctgtcc
ccggacgaggtggcccgctacctgttccgccgcgtggtgtcctggggccgcagctccaac
gtcttcctgcgcaacggcgcgcgcctgtacctcgatgtgggcagccatccggaatacgcc
accgccgaatgtgacagcctggtgcagctggtcacgcacgaccgggccggcgaatgggtg
ctcgaagagctgctcatcgacgccgagcagcggcttgccgacgagggcatcggtggcgat
atctacctgttcaagaacaacaccgactcggcgggcaactcatacggctgccatgagaac
tatctgatcgtgcgggccggtgagttctcccggatctccgatgtgctgctgcccttcttg
gtcacccgccagctgatctgcggggccggcaaggtgctgcagacgcccaaggccgccacc
ttctgcttgagccagcgcgccgagcacatctgggagggcgtctcctcggcgaccacccgc
agccgcccgatcatcaacacccgcgacgagccgcacgccgacgccgagaagtaccggcgg
ctgcacgtcatcgtcggcgactccaacatgtccgagaccaccaccatgctcaaggtgggt
accgccgcgctcgtgctggagatgatcgaaaatggagtcgccttccgtgatttttccctg
gataaccccatccgcgccatccgcgaggtcagccacgacgtcaccggccgacggccggtg
cggttggccggcgggcgtcaggccagcgcgttggacatccagcgggagtactactcccgt
gccgtcgagcatttgcagacccgcgaacccaacgcgcagatcgagcagatcgtcgaccta
tggggtcgccagctggacgccgtcgagagccaggatttcgccaaggtggacaccgaaatc
gactgggtgatcaaacgcaagctattccagcgctaccaggaccgctacaacatggagctg
tccgacccaaagatcgcccagctggatctggcctaccacgacatcaagcgcggtcgcggc
gtcttcgacctgctgcagcgcaagggcctggcggcgcgggtgaccaccgacgaagagatc
gccgacgccgtcgacaacccgccgcagaccacccgggccaggttgcgcggcgaattcatc
agcgccgcccaggcggcgggacgcgatttcaccgtcgactgggtgcatctcaaactcaac
gaccaggcgcagcggaccgtgctgtgcaaggacccgttccgggcggtcgacgagcgagtc
aagcggctgatcgccagcatgtag
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