KEGG   Methanobrevibacter smithii: Msm_0164
Entry
Msm_0164          CDS       T00539                                 
Name
(GenBank) conserved hypothetical protein predicted to be involved in DNA repair Msm_0164
  KO
K15342  CRISP-associated protein Cas1
Organism
msi  Methanobrevibacter smithii
Brite
KEGG Orthology (KO) [BR:msi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msi03400]
    Msm_0164
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:msi02048]
    Msm_0164
DNA repair and recombination proteins [BR:msi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     Msm_0164
Prokaryotic defense system [BR:msi02048]
 CRISPR-Cas system
  Universal Cas proteins
   Msm_0164
SSDB
Motif
Pfam: Cas_Cas1 zf-SAP30
Other DBs
NCBI-ProteinID: ABQ86369
UniProt: A5UJJ1
LinkDB
Position
complement(156000..156968)
AA seq 322 aa
MSKKNYYILSEGILKRKENTIYFVNEKGKKPIPINKVYSIYAYGQITFSSQVMSLLSKNG
VPIHFFNYYGFYSGSYYPRETLLSGDLLVKQADYYLNIQKRLELAKLFVEGAANNILKVL
AYYKIENNIKETLSELNSTNKITEIMNIEGRIRSEYYSKFDEILPDDFKMEGRSRQPPKN
MINSLISFGNSMMYSTVLTELYNTQLNPTISYLHEPSERRFSLSLDLSEIFKPIFVDRLI
FYMVNKRMLSKKDFNEDLNCCLLNDKGRNKFIKEYNKRLEKTIKHKKLKKNVSYQRLIRL
EAYKLKKHILGIEKYDPFVSWW
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtcaaaaaagaattattatatcctgtctgaagggattcttaaaaggaaagaaaatact
atttattttgtcaatgaaaaaggtaaaaaaccaatcccaatcaataaagtatattcaatt
tatgcatatggtcagataacattttcttcacaggtaatgagtcttttatctaaaaatgga
gttcctattcattttttcaattattatggtttttatagcggatcttattatcctcgtgaa
acattattgtctggtgatttgttagtaaaacaggcagattattatttaaatattcaaaaa
aggttggagttagctaaattatttgttgaaggagcagcaaataatattttaaaggtttta
gcatattataaaattgaaaacaatattaaagaaacattatcagagttaaattcaacaaat
aaaataactgaaataatgaatattgaaggtaggattcgctcggaatattattctaaattt
gatgaaattcttcccgatgattttaaaatggaaggcagatccagacaacctcctaaaaat
atgataaattctttaattagctttggaaattcaatgatgtattctacagttttgacagaa
ttgtataatacacaattaaatcctacaatatcttatcttcatgaaccttctgaaagaaga
ttttcactatctttggatcttagtgaaatttttaagccgatttttgttgataggttgatt
ttttatatggttaacaaaagaatgttgtctaaaaaagattttaatgaagatttaaactgt
tgtcttttaaatgataaaggacgaaataaattcataaaagaatacaataaacgacttgaa
aaaacgattaaacataaaaaattaaagaaaaatgtttcttaccaaagattaatccgatta
gaagcatataaacttaaaaaacatattttaggcattgaaaaatatgatccattcgtaagc
tggtggtga

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